52 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nkiras1	Uncharacterized protein. (203 aa)
	dhx58	Uncharacterized protein. (681 aa)
	vwc2l	VWFC domain-containing protein. (222 aa)
	crebbp	Uncharacterized protein. (2424 aa)
	nkiras2	Uncharacterized protein. (190 aa)
	Dhx58.L	Uncharacterized protein. (682 aa)
	vwc2l-2	VWFC domain-containing protein. (222 aa)
	rnf216	Uncharacterized protein. (864 aa)
	crebbp-2	Uncharacterized protein. (2453 aa)
	A0A1L8EZF8	OTU domain-containing protein. (415 aa)
	Nfkbia.S	ANK_REP_REGION domain-containing protein. (312 aa)
	A0A1L8F1J6	NEMO domain-containing protein. (307 aa)
	A0A1L8F5F3	OTU domain-containing protein. (493 aa)
	Hsp90alpha	HATPase_c domain-containing protein. (729 aa)
	Nfkbia.L	ANK_REP_REGION domain-containing protein. (315 aa)
	irf3	IRF tryptophan pentad repeat domain-containing protein. (471 aa)
	nfkb2	Uncharacterized protein. (960 aa)
	nlrx1	NACHT domain-containing protein. (953 aa)
	Irf3.L	IRF tryptophan pentad repeat domain-containing protein. (466 aa)
	tax1bp1	Uncharacterized protein. (838 aa)
	rnf125	Uncharacterized protein. (224 aa)
	vwc2	VWFC domain-containing protein. (324 aa)
	rnf125-2	Uncharacterized protein. (222 aa)
	Tnfaip3.S	Uncharacterized protein. (781 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8G6W7	HATPase_c domain-containing protein. (634 aa)
	ep300	Uncharacterized protein. (2495 aa)
	ep300-2	Uncharacterized protein. (2492 aa)
	ccdc71l	Uncharacterized protein. (209 aa)
	A0A1L8GUL9	Protein kinase domain-containing protein. (690 aa)
	tbk1	Protein kinase domain-containing protein. (725 aa)
	ccdc71l-2	Uncharacterized protein. (213 aa)
	ikbkb	Uncharacterized protein. (769 aa)
	Tomm70.S	TPR_REGION domain-containing protein. (576 aa)
	A0A1L8H564	BPTI/Kunitz inhibitor domain-containing protein. (751 aa)
	ikbke	Protein kinase domain-containing protein. (719 aa)
	App.L	BPTI/Kunitz inhibitor domain-containing protein. (749 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	ikbke-2	Protein kinase domain-containing protein. (719 aa)
	A0A1L8HHS5	Protein S100; Belongs to the S-100 family. (109 aa)
	A0A1L8HKI7	CARD_2 domain-containing protein. (384 aa)
	Nfkb1.S	Uncharacterized protein. (894 aa)
	kxd1	KxDL domain-containing protein. (195 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HSE4	CARD_2 domain-containing protein. (620 aa)
	Nfkb1.L	Uncharacterized protein. (959 aa)
	Kxd1.L	KxDL domain-containing protein. (195 aa)
	tax1bp1-2	Tax1 binding protein 1. (840 aa)
	nfkb2-2	LOC397698 protein. (959 aa)
	hsp90ab1	Hsp90beta protein. (722 aa)
	rps27a	MGC81889 protein. (156 aa)
	ubc-2	Ubc-prov protein. (609 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EZF8	A0A1L8G5V1	A0A1L8EZF8	A0A1L8G5V1	OTU domain-containing protein.	Ubiquitin-like domain-containing protein.	0.849
A0A1L8EZF8	A0A1L8HCZ9	A0A1L8EZF8	A0A1L8HCZ9	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8EZF8	rps27a	A0A1L8EZF8	Q6GMC1	OTU domain-containing protein.	MGC81889 protein.	0.849
A0A1L8EZF8	ubc	A0A1L8EZF8	A0A1L8HQK4	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8EZF8	ubc-2	A0A1L8EZF8	Q7SY79	OTU domain-containing protein.	Ubc-prov protein.	0.715
A0A1L8F1J6	A0A1L8GUL9	A0A1L8F1J6	A0A1L8GUL9	NEMO domain-containing protein.	Protein kinase domain-containing protein.	0.615
A0A1L8F1J6	A0A1L8HCZ9	A0A1L8F1J6	A0A1L8HCZ9	NEMO domain-containing protein.	Uncharacterized protein.	0.549
A0A1L8F1J6	ikbkb	A0A1L8F1J6	A0A1L8H261	NEMO domain-containing protein.	Uncharacterized protein.	0.983
A0A1L8F1J6	ikbke	A0A1L8F1J6	A0A1L8H797	NEMO domain-containing protein.	Protein kinase domain-containing protein.	0.615
A0A1L8F1J6	ikbke-2	A0A1L8F1J6	A0A1L8HES5	NEMO domain-containing protein.	Protein kinase domain-containing protein.	0.615
A0A1L8F1J6	tax1bp1	A0A1L8F1J6	A0A1L8FRD9	NEMO domain-containing protein.	Uncharacterized protein.	0.498
A0A1L8F1J6	tax1bp1-2	A0A1L8F1J6	B7ZP94	NEMO domain-containing protein.	Tax1 binding protein 1.	0.498
A0A1L8F1J6	tbk1	A0A1L8F1J6	A0A1L8GYK0	NEMO domain-containing protein.	Protein kinase domain-containing protein.	0.615
A0A1L8F1J6	ubc	A0A1L8F1J6	A0A1L8HQK4	NEMO domain-containing protein.	Uncharacterized protein.	0.549
A0A1L8F1J6	ubc-2	A0A1L8F1J6	Q7SY79	NEMO domain-containing protein.	Ubc-prov protein.	0.549
A0A1L8F5F3	A0A1L8G5V1	A0A1L8F5F3	A0A1L8G5V1	OTU domain-containing protein.	Ubiquitin-like domain-containing protein.	0.849
A0A1L8F5F3	A0A1L8HCZ9	A0A1L8F5F3	A0A1L8HCZ9	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8F5F3	rps27a	A0A1L8F5F3	Q6GMC1	OTU domain-containing protein.	MGC81889 protein.	0.849
A0A1L8F5F3	ubc	A0A1L8F5F3	A0A1L8HQK4	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8F5F3	ubc-2	A0A1L8F5F3	Q7SY79	OTU domain-containing protein.	Ubc-prov protein.	0.715