59 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A310U2P2	Uncharacterized protein. (359 aa)
	spry2-2	LOC398313 protein. (314 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	uba52	MGC80109 protein. (128 aa)
	ptpn3	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (920 aa)
	rps27a	MGC81889 protein. (156 aa)
	LOC496320	LOC496320 protein. (353 aa)
	MGC78966	MGC78966 protein. (366 aa)
	spry1-2	Sprouty 1. (319 aa)
	Eps15l1.L	Uncharacterized protein. (897 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	ereg-2	Uncharacterized protein. (156 aa)
	areg-2	EGF-like domain-containing protein. (228 aa)
	btc	EGF-like domain-containing protein. (170 aa)
	Epgn.L	EGF-like domain-containing protein. (139 aa)
	Egf.L	Uncharacterized protein. (1031 aa)
	spry1	Uncharacterized protein. (342 aa)
	ubc	Uncharacterized protein. (533 aa)
	Sh3gl2.S	Uncharacterized protein. (410 aa)
	A0A1L8HN07	Uncharacterized protein. (366 aa)
	epgn	EGF-like domain-containing protein. (139 aa)
	Btc.S	EGF-like domain-containing protein. (287 aa)
	areg	EGF-like domain-containing protein. (226 aa)
	ereg	Uncharacterized protein. (156 aa)
	spry2	Uncharacterized protein. (307 aa)
	Sh3d21.L	Uncharacterized protein. (545 aa)
	A0A1L8HDJ6	Uncharacterized protein. (558 aa)
	A0A1L8HD37	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (219 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	sh3d21	Uncharacterized protein. (556 aa)
	A0A1L8H5X7	Uncharacterized protein. (575 aa)
	cryba1.2	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (209 aa)
	tgfa	EGF-like domain-containing protein. (160 aa)
	A0A1L8H0P0	Uncharacterized protein. (351 aa)
	hbegf	EGF-like domain-containing protein. (196 aa)
	Sh3gl3.S	Uncharacterized protein. (351 aa)
	Tgfa.S	EGF-like domain-containing protein. (159 aa)
	eps15-2	Uncharacterized protein. (980 aa)
	eps15	Uncharacterized protein. (971 aa)
	A0A1L8GBL7	Uncharacterized protein. (589 aa)
	A0A1L8G8K5	Uncharacterized protein. (221 aa)
	A0A1L8G8J9	Uncharacterized protein. (1020 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8G5I9	Uncharacterized protein. (733 aa)
	A0A1L8FYK1	Uncharacterized protein. (75 aa)
	A0A1L8FYK0	Tyrosine-protein phosphatase domain-containing protein. (128 aa)
	A0A1L8FYJ9	Uncharacterized protein. (768 aa)
	A0A1L8FYJ4	Uncharacterized protein. (480 aa)
	stam	Uncharacterized protein. (520 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	A0A1L8FSR4	Uncharacterized protein. (1463 aa)
	Stam.S	Uncharacterized protein. (504 aa)
	A0A1L8FGA0	Uncharacterized protein. (191 aa)
	stam2	Uncharacterized protein. (524 aa)
	grb2-2	Uncharacterized protein. (229 aa)
	Hgs.L	Uncharacterized protein. (749 aa)
	A0A1L8ENX9	Uncharacterized protein. (492 aa)
	grb2	Uncharacterized protein. (229 aa)
	Ptprt.L	Uncharacterized protein. (1457 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ENX9	A0A1L8FGA0	A0A1L8ENX9	A0A1L8FGA0	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A1L8ENX9	A0A1L8FTA7	A0A1L8ENX9	A0A1L8FTA7	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.787
A0A1L8ENX9	A0A1L8G5I9	A0A1L8ENX9	A0A1L8G5I9	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A1L8ENX9	A0A1L8G5V1	A0A1L8ENX9	A0A1L8G5V1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.896
A0A1L8ENX9	A0A1L8GBL7	A0A1L8ENX9	A0A1L8GBL7	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A1L8ENX9	A0A1L8H0P0	A0A1L8ENX9	A0A1L8H0P0	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A1L8ENX9	A0A1L8H5X7	A0A1L8ENX9	A0A1L8H5X7	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A1L8ENX9	A0A1L8HCZ9	A0A1L8ENX9	A0A1L8HCZ9	Uncharacterized protein.	Uncharacterized protein.	0.861
A0A1L8ENX9	A0A1L8HDJ6	A0A1L8ENX9	A0A1L8HDJ6	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A1L8ENX9	A0A1L8HN07	A0A1L8ENX9	A0A1L8HN07	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A1L8ENX9	A0A1L8HX68	A0A1L8ENX9	A0A1L8HX68	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.787
A0A1L8ENX9	A0A310U2P2	A0A1L8ENX9	A0A310U2P2	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A1L8ENX9	Egf.L	A0A1L8ENX9	A0A1L8HUT3	Uncharacterized protein.	Uncharacterized protein.	0.651
A0A1L8ENX9	Eps15l1.L	A0A1L8ENX9	A0A1L8HY01	Uncharacterized protein.	Uncharacterized protein.	0.627
A0A1L8ENX9	Hgs.L	A0A1L8ENX9	A0A1L8ETK7	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A1L8ENX9	LOC496320	A0A1L8ENX9	Q5HZS1	Uncharacterized protein.	LOC496320 protein.	0.420
A0A1L8ENX9	MGC78966	A0A1L8ENX9	Q3KQD0	Uncharacterized protein.	MGC78966 protein.	0.420
A0A1L8ENX9	Sh3d21.L	A0A1L8ENX9	A0A1L8HE58	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A1L8ENX9	Sh3gl2.S	A0A1L8ENX9	A0A1L8HNY6	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A1L8ENX9	Sh3gl3.S	A0A1L8ENX9	A0A1L8GST6	Uncharacterized protein.	Uncharacterized protein.	0.420