18 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8ER15	Uncharacterized protein. (264 aa)
	A0A1L8EYQ6	Uncharacterized protein. (305 aa)
	A0A1L8FEW4	Phosphodiesterase. (855 aa)
	A0A1L8FJI6	Phosphodiesterase. (857 aa)
	Cngb3.L	Cyclic nucleotide-binding domain-containing protein. (743 aa)
	A0A1L8GF00	Cyclic nucleotide-binding domain-containing protein. (1099 aa)
	A0A1L8GHL0	Rhodopsin. (354 aa)
	A0A1L8GLI0	Cyclic nucleotide-binding domain-containing protein. (1023 aa)
	Rho.L	Rhodopsin. (459 aa)
	Opsin	Rhodopsin. (403 aa)
	A0A1L8GV44	Phosphodiesterase. (866 aa)
	A0A1L8GXR1	Phosphodiesterase. (866 aa)
	A0A1L8HL43	Cyclic nucleotide-binding domain-containing protein. (714 aa)
	cnga1	Cyclic nucleotide-binding domain-containing protein. (706 aa)
	pde6b	Phosphodiesterase. (858 aa)
	pde6h	Pde6hb protein. (87 aa)
	pde6g	LOC495443 protein. (87 aa)
	pde6h-2	Pde6ha protein. (87 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ER15	A0A1L8FEW4	A0A1L8ER15	A0A1L8FEW4	Uncharacterized protein.	Phosphodiesterase.	0.500
A0A1L8ER15	A0A1L8FJI6	A0A1L8ER15	A0A1L8FJI6	Uncharacterized protein.	Phosphodiesterase.	0.500
A0A1L8EYQ6	A0A1L8FEW4	A0A1L8EYQ6	A0A1L8FEW4	Uncharacterized protein.	Phosphodiesterase.	0.500
A0A1L8EYQ6	A0A1L8FJI6	A0A1L8EYQ6	A0A1L8FJI6	Uncharacterized protein.	Phosphodiesterase.	0.500
A0A1L8FEW4	A0A1L8ER15	A0A1L8FEW4	A0A1L8ER15	Phosphodiesterase.	Uncharacterized protein.	0.500
A0A1L8FEW4	A0A1L8EYQ6	A0A1L8FEW4	A0A1L8EYQ6	Phosphodiesterase.	Uncharacterized protein.	0.500
A0A1L8FEW4	A0A1L8GF00	A0A1L8FEW4	A0A1L8GF00	Phosphodiesterase.	Cyclic nucleotide-binding domain-containing protein.	0.430
A0A1L8FEW4	A0A1L8GHL0	A0A1L8FEW4	A0A1L8GHL0	Phosphodiesterase.	Rhodopsin.	0.424
A0A1L8FEW4	A0A1L8GLI0	A0A1L8FEW4	A0A1L8GLI0	Phosphodiesterase.	Cyclic nucleotide-binding domain-containing protein.	0.430
A0A1L8FEW4	A0A1L8HL43	A0A1L8FEW4	A0A1L8HL43	Phosphodiesterase.	Cyclic nucleotide-binding domain-containing protein.	0.400
A0A1L8FEW4	Cngb3.L	A0A1L8FEW4	A0A1L8FZD8	Phosphodiesterase.	Cyclic nucleotide-binding domain-containing protein.	0.430
A0A1L8FEW4	Opsin	A0A1L8FEW4	A0A1L8GPM0	Phosphodiesterase.	Rhodopsin.	0.424
A0A1L8FEW4	Rho.L	A0A1L8FEW4	A0A1L8GPJ9	Phosphodiesterase.	Rhodopsin.	0.424
A0A1L8FEW4	cnga1	A0A1L8FEW4	A0A1L8HTY9	Phosphodiesterase.	Cyclic nucleotide-binding domain-containing protein.	0.400
A0A1L8FEW4	pde6g	A0A1L8FEW4	Q6GLT6	Phosphodiesterase.	LOC495443 protein.	0.875
A0A1L8FEW4	pde6h	A0A1L8FEW4	Q66IX8	Phosphodiesterase.	Pde6hb protein.	0.500
A0A1L8FEW4	pde6h-2	A0A1L8FEW4	Q6GLU4	Phosphodiesterase.	Pde6ha protein.	0.500
A0A1L8FJI6	A0A1L8ER15	A0A1L8FJI6	A0A1L8ER15	Phosphodiesterase.	Uncharacterized protein.	0.500
A0A1L8FJI6	A0A1L8EYQ6	A0A1L8FJI6	A0A1L8EYQ6	Phosphodiesterase.	Uncharacterized protein.	0.500
A0A1L8FJI6	A0A1L8GF00	A0A1L8FJI6	A0A1L8GF00	Phosphodiesterase.	Cyclic nucleotide-binding domain-containing protein.	0.430