16 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	trex2	Exonuclease domain-containing protein. (232 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	uba52	MGC80109 protein. (128 aa)
	rps27a	MGC81889 protein. (156 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	ddx41	Uncharacterized protein. (614 aa)
	A0A1L8GRD3	Uncharacterized protein. (343 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	Irf3.L	IRF tryptophan pentad repeat domain-containing protein. (466 aa)
	irf3	IRF tryptophan pentad repeat domain-containing protein. (471 aa)
	trim32	Uncharacterized protein. (649 aa)
	A0A1L8ESU9	Uncharacterized protein. (278 aa)
	A0A1L8EK50	Exonuclease domain-containing protein. (175 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ESU9	Irf3.L	A0A1L8ESU9	A0A1L8FNA8	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.973
A0A1L8ESU9	ddx41	A0A1L8ESU9	A0A1L8GXY5	Uncharacterized protein.	Uncharacterized protein.	0.650
A0A1L8ESU9	irf3	A0A1L8ESU9	A0A1L8FGY4	Uncharacterized protein.	IRF tryptophan pentad repeat domain-containing protein.	0.972
A0A1L8FTA7	A0A1L8G5V1	A0A1L8FTA7	A0A1L8G5V1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.989
A0A1L8FTA7	A0A1L8HCZ9	A0A1L8FTA7	A0A1L8HCZ9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.908
A0A1L8FTA7	rps27a	A0A1L8FTA7	Q6GMC1	Ubiquitin-like domain-containing protein.	MGC81889 protein.	0.989
A0A1L8FTA7	trim32	A0A1L8FTA7	A0A1L8F6U8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.425
A0A1L8FTA7	ubc	A0A1L8FTA7	A0A1L8HQK4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.907
A0A1L8FTA7	ubc-2	A0A1L8FTA7	Q7SY79	Ubiquitin-like domain-containing protein.	Ubc-prov protein.	0.907
A0A1L8G5V1	A0A1L8FTA7	A0A1L8G5V1	A0A1L8FTA7	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.989
A0A1L8G5V1	A0A1L8GRD3	A0A1L8G5V1	A0A1L8GRD3	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.759
A0A1L8G5V1	A0A1L8HCZ9	A0A1L8G5V1	A0A1L8HCZ9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.935
A0A1L8G5V1	A0A1L8HX68	A0A1L8G5V1	A0A1L8HX68	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.989
A0A1L8G5V1	Irf3.L	A0A1L8G5V1	A0A1L8FNA8	Ubiquitin-like domain-containing protein.	IRF tryptophan pentad repeat domain-containing protein.	0.448
A0A1L8G5V1	irf3	A0A1L8G5V1	A0A1L8FGY4	Ubiquitin-like domain-containing protein.	IRF tryptophan pentad repeat domain-containing protein.	0.448
A0A1L8G5V1	rps27a	A0A1L8G5V1	Q6GMC1	Ubiquitin-like domain-containing protein.	MGC81889 protein.	0.900
A0A1L8G5V1	trim32	A0A1L8G5V1	A0A1L8F6U8	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.584
A0A1L8G5V1	uba52	A0A1L8G5V1	Q6GQF3	Ubiquitin-like domain-containing protein.	MGC80109 protein.	0.989
A0A1L8G5V1	ubc	A0A1L8G5V1	A0A1L8HQK4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.934
A0A1L8G5V1	ubc-2	A0A1L8G5V1	Q7SY79	Ubiquitin-like domain-containing protein.	Ubc-prov protein.	0.934