38 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	A0A1L8EUE2	BTB domain-containing protein. (245 aa)
	Nup85.L	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (882 aa)
	ube2i	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	Nup50.L	RanBD1 domain-containing protein. (440 aa)
	A0A1L8GPQ4	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (522 aa)
	A0A1L8G1M7	Uncharacterized protein. (134 aa)
	Nup43.S	WD_REPEATS_REGION domain-containing protein. (375 aa)
	A0A1L8G6N8	G_PROTEIN_RECEP_F1_2 domain-containing protein. (321 aa)
	ndc1	Uncharacterized protein. (660 aa)
	Nup93.L	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	A0A1L8EMT3	BTB domain-containing protein. (239 aa)
	A0A1L8GMF4	Uncharacterized protein. (731 aa)
	Seh1l.S	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (383 aa)
	A0A1L8FM96	RING-type domain-containing protein. (289 aa)
	A0A1L8FM90	RING-type domain-containing protein. (301 aa)
	A0A1L8FM62	RING-type domain-containing protein. (306 aa)
	nup62	Nuclear pore complex glycoprotein p62. (547 aa)
	Rae1	Rae1/Gle2 protein. (368 aa)
	sec13	Sec13l1-prov protein; Belongs to the WD repeat SEC13 family. (320 aa)
	ranbp3-2	Ran binding protein 3. (516 aa)
	nup188	Uncharacterized protein. (1739 aa)
	A0A1L8EXX7	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	nup50	LOC503675 protein. (436 aa)
	rae1	LOC100049109 protein. (368 aa)
	A0A310U7J7	Uncharacterized protein. (394 aa)
	Pom121-a	Uncharacterized protein. (1052 aa)
	Nup205.L	Uncharacterized protein. (99 aa)
	A0A1L8I2I7	RanBD1 domain-containing protein. (514 aa)
	topors-2	RING-type domain-containing protein. (1014 aa)
	ranbp3l	RanBD1 domain-containing protein. (516 aa)
	topors	RING-type domain-containing protein. (1015 aa)
	ranbp3	RanBD1 domain-containing protein. (520 aa)
	Pom121-b	Uncharacterized protein. (906 aa)
	Seh1l.L	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (383 aa)
	A0A1L8FY07	RING-type domain-containing protein. (199 aa)
	A0A1L8FVZ0	C3H1-type domain-containing protein. (497 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EMT3	A0A1L8FM62	A0A1L8EMT3	A0A1L8FM62	BTB domain-containing protein.	RING-type domain-containing protein.	0.534
A0A1L8EMT3	A0A1L8FM90	A0A1L8EMT3	A0A1L8FM90	BTB domain-containing protein.	RING-type domain-containing protein.	0.534
A0A1L8EMT3	A0A1L8FM96	A0A1L8EMT3	A0A1L8FM96	BTB domain-containing protein.	RING-type domain-containing protein.	0.534
A0A1L8EMT3	A0A1L8FY07	A0A1L8EMT3	A0A1L8FY07	BTB domain-containing protein.	RING-type domain-containing protein.	0.534
A0A1L8EMT3	A0A1L8GMF4	A0A1L8EMT3	A0A1L8GMF4	BTB domain-containing protein.	Uncharacterized protein.	0.578
A0A1L8EMT3	A0A1L8GPQ4	A0A1L8EMT3	A0A1L8GPQ4	BTB domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.539
A0A1L8EMT3	Nup205.L	A0A1L8EMT3	A0A310U2L0	BTB domain-containing protein.	Uncharacterized protein.	0.592
A0A1L8EMT3	Nup43.S	A0A1L8EMT3	A0A1L8G2B9	BTB domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.679
A0A1L8EMT3	Nup50.L	A0A1L8EMT3	A0A1L8GW32	BTB domain-containing protein.	RanBD1 domain-containing protein.	0.540
A0A1L8EMT3	Nup85.L	A0A1L8EMT3	A0A1L8EUC8	BTB domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.714
A0A1L8EMT3	Nup93.L	A0A1L8EMT3	A0A1L8GKJ9	BTB domain-containing protein.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.749
A0A1L8EMT3	Rae1	A0A1L8EMT3	Q7ZZY7	BTB domain-containing protein.	Rae1/Gle2 protein.	0.593
A0A1L8EMT3	Seh1l.L	A0A1L8EMT3	A0A1L8FYF0	BTB domain-containing protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.630
A0A1L8EMT3	Seh1l.S	A0A1L8EMT3	A0A1L8FSQ3	BTB domain-containing protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.630
A0A1L8EMT3	Sumo1.L	A0A1L8EMT3	A0A1L8EWZ5	BTB domain-containing protein.	Ubiquitin-like domain-containing protein.	0.914
A0A1L8EMT3	Sumo1.S	A0A1L8EMT3	A0A1L8EPQ0	BTB domain-containing protein.	Ubiquitin-like domain-containing protein.	0.914
A0A1L8EMT3	ndc1	A0A1L8EMT3	A0A1L8GFX9	BTB domain-containing protein.	Uncharacterized protein.	0.578
A0A1L8EMT3	nup50	A0A1L8EMT3	Q6DCU3	BTB domain-containing protein.	LOC503675 protein.	0.540
A0A1L8EMT3	nup62	A0A1L8EMT3	Q91349	BTB domain-containing protein.	Nuclear pore complex glycoprotein p62.	0.609
A0A1L8EMT3	rae1	A0A1L8EMT3	A3KND1	BTB domain-containing protein.	LOC100049109 protein.	0.593