16 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8GW39	Uncharacterized protein. (312 aa)
	rnf222	RING-type domain-containing protein. (210 aa)
	Tgfb1i1.S	Uncharacterized protein; Belongs to the paxillin family. (561 aa)
	Rnf222.S	RING-type domain-containing protein. (255 aa)
	Tgfb1i1.L	Uncharacterized protein; Belongs to the paxillin family. (501 aa)
	A0A1L8FQV5	Uncharacterized protein. (277 aa)
	A0A1L8FVM7	Uncharacterized protein. (349 aa)
	A0A1L8GDR9	Uncharacterized protein. (372 aa)
	tesk2	Protein kinase domain-containing protein. (605 aa)
	A0A1L8GIH6	Uncharacterized protein. (372 aa)
	tesk2-2	Protein kinase domain-containing protein. (663 aa)
	pxn-2	LOC397826 protein; Belongs to the paxillin family. (539 aa)
	parvb	MGC115486 protein. (365 aa)
	A0A310TR54	Protein kinase domain-containing protein. (857 aa)
	A0A1L8I3C2	Protein kinase domain-containing protein. (852 aa)
	pxn	Uncharacterized protein; Belongs to the paxillin family. (542 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8FQV5	A0A1L8GDR9	A0A1L8FQV5	A0A1L8GDR9	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8FQV5	A0A1L8GIH6	A0A1L8FQV5	A0A1L8GIH6	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8FQV5	A0A1L8GW39	A0A1L8FQV5	A0A1L8GW39	Uncharacterized protein.	Uncharacterized protein.	0.619
A0A1L8FQV5	parvb	A0A1L8FQV5	Q4QQZ5	Uncharacterized protein.	MGC115486 protein.	0.654
A0A1L8FVM7	A0A1L8GDR9	A0A1L8FVM7	A0A1L8GDR9	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8FVM7	A0A1L8GIH6	A0A1L8FVM7	A0A1L8GIH6	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8FVM7	A0A1L8GW39	A0A1L8FVM7	A0A1L8GW39	Uncharacterized protein.	Uncharacterized protein.	0.619
A0A1L8FVM7	parvb	A0A1L8FVM7	Q4QQZ5	Uncharacterized protein.	MGC115486 protein.	0.654
A0A1L8GDR9	A0A1L8FQV5	A0A1L8GDR9	A0A1L8FQV5	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8GDR9	A0A1L8FVM7	A0A1L8GDR9	A0A1L8FVM7	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8GDR9	A0A1L8I3C2	A0A1L8GDR9	A0A1L8I3C2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.601
A0A1L8GDR9	A0A310TR54	A0A1L8GDR9	A0A310TR54	Uncharacterized protein.	Protein kinase domain-containing protein.	0.601
A0A1L8GDR9	Tgfb1i1.L	A0A1L8GDR9	A0A1L8EYV7	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.802
A0A1L8GDR9	Tgfb1i1.S	A0A1L8GDR9	A0A1L8ER43	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.802
A0A1L8GDR9	pxn	A0A1L8GDR9	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.984
A0A1L8GDR9	pxn-2	A0A1L8GDR9	Q9I957	Uncharacterized protein.	LOC397826 protein; Belongs to the paxillin family.	0.984
A0A1L8GDR9	tesk2	A0A1L8GDR9	A0A1L8GFN2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.519
A0A1L8GDR9	tesk2-2	A0A1L8GDR9	A0A1L8GM72	Uncharacterized protein.	Protein kinase domain-containing protein.	0.519
A0A1L8GIH6	A0A1L8FQV5	A0A1L8GIH6	A0A1L8FQV5	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8GIH6	A0A1L8FVM7	A0A1L8GIH6	A0A1L8FVM7	Uncharacterized protein.	Uncharacterized protein.	0.654