18 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8HBT5	Ig-like domain-containing protein. (236 aa)
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	ube2i	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	A0A1L8EXX7	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	A0A1L8FM62	RING-type domain-containing protein. (306 aa)
	A0A1L8FM90	RING-type domain-containing protein. (301 aa)
	A0A1L8FM96	RING-type domain-containing protein. (289 aa)
	A0A1L8FY07	RING-type domain-containing protein. (199 aa)
	A0A1L8H5P3	Uncharacterized protein. (275 aa)
	A0A1L8H5P5	Ig-like domain-containing protein. (261 aa)
	A0A1L8HBS4	Uncharacterized protein. (275 aa)
	vtcn1	Uncharacterized protein. (275 aa)
	A0A1L8HBT0	Ig-like domain-containing protein. (289 aa)
	A0A1L8HBU5	Uncharacterized protein. (230 aa)
	A0A1L8HC20	Ig-like domain-containing protein. (263 aa)
	topors	RING-type domain-containing protein. (1015 aa)
	topors-2	RING-type domain-containing protein. (1014 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EXX7	A0A1L8FM62	A0A1L8EXX7	A0A1L8FM62	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.589
A0A1L8EXX7	A0A1L8FM90	A0A1L8EXX7	A0A1L8FM90	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.589
A0A1L8EXX7	A0A1L8FM96	A0A1L8EXX7	A0A1L8FM96	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.589
A0A1L8EXX7	A0A1L8FY07	A0A1L8EXX7	A0A1L8FY07	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.589
A0A1L8EXX7	Sumo1.L	A0A1L8EXX7	A0A1L8EWZ5	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-like domain-containing protein.	0.982
A0A1L8EXX7	Sumo1.S	A0A1L8EXX7	A0A1L8EPQ0	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	Ubiquitin-like domain-containing protein.	0.982
A0A1L8EXX7	topors	A0A1L8EXX7	A0A1L8HNT2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.589
A0A1L8EXX7	topors-2	A0A1L8EXX7	A0A1L8HXN2	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.589
A0A1L8FM62	A0A1L8EXX7	A0A1L8FM62	A0A1L8EXX7	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.589
A0A1L8FM62	Sumo1.L	A0A1L8FM62	A0A1L8EWZ5	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.539
A0A1L8FM62	Sumo1.S	A0A1L8FM62	A0A1L8EPQ0	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.539
A0A1L8FM62	ube2i	A0A1L8FM62	A0A1L8EQE3	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.589
A0A1L8FM90	A0A1L8EXX7	A0A1L8FM90	A0A1L8EXX7	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.589
A0A1L8FM90	Sumo1.L	A0A1L8FM90	A0A1L8EWZ5	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.539
A0A1L8FM90	Sumo1.S	A0A1L8FM90	A0A1L8EPQ0	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.539
A0A1L8FM90	ube2i	A0A1L8FM90	A0A1L8EQE3	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.589
A0A1L8FM96	A0A1L8EXX7	A0A1L8FM96	A0A1L8EXX7	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.589
A0A1L8FM96	Sumo1.L	A0A1L8FM96	A0A1L8EWZ5	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.539
A0A1L8FM96	Sumo1.S	A0A1L8FM96	A0A1L8EPQ0	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.539
A0A1L8FM96	ube2i	A0A1L8FM96	A0A1L8EQE3	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.589