57 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	birc2	Uncharacterized protein. (609 aa)
	Birc7.L	RING-type domain-containing protein. (401 aa)
	A0A1L8ET49	RING-type domain-containing protein. (407 aa)
	Traf2.S	TNF receptor-associated factor. (461 aa)
	A0A1L8F178	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (548 aa)
	A0A1L8F2K4	RING-type domain-containing protein. (107 aa)
	rack1	WD_REPEATS_REGION domain-containing protein. (276 aa)
	A0A1L8F509	Ubiquitin carboxyl-terminal hydrolase. (617 aa)
	traf2	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (527 aa)
	A0A1L8F654	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (548 aa)
	A0A1L8F6E0	WD_REPEATS_REGION domain-containing protein. (165 aa)
	A0A1L8F7B5	RING-type domain-containing protein. (488 aa)
	A0A1L8FD13	Ubiquitin carboxyl-terminal hydrolase. (616 aa)
	usp2	Ubiquitin carboxyl-terminal hydrolase. (559 aa)
	tnfrsf1a	Uncharacterized protein. (422 aa)
	usp2-2	Ubiquitin carboxyl-terminal hydrolase. (559 aa)
	A0A1L8FQU0	OTU domain-containing protein. (291 aa)
	ripk1	Uncharacterized protein. (666 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	A0A1L8FU17	IBR domain-containing protein. (240 aa)
	A0A1L8FU42	Uncharacterized protein. (381 aa)
	otud1	OTU domain-containing protein. (319 aa)
	A0A1L8FXS1	Uncharacterized protein. (581 aa)
	A0A1L8FZB6	RING-type domain-containing protein. (643 aa)
	A0A1L8G0A4	Uncharacterized protein; Belongs to the peptidase C19 family. (846 aa)
	A0A1L8G0G9	Uncharacterized protein. (659 aa)
	Tnfaip3.S	Uncharacterized protein. (781 aa)
	A0A1L8G366	Protein kinase domain-containing protein. (588 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	tnfsf10	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (282 aa)
	A0A1L8GER2	Uncharacterized protein; Belongs to the peptidase C19 family. (941 aa)
	tab1	PPM-type phosphatase domain-containing protein. (500 aa)
	tradd	Death domain-containing protein. (303 aa)
	cyld	Uncharacterized protein. (973 aa)
	Optn.L	CCHC NOA-type domain-containing protein. (570 aa)
	ikbkb	Uncharacterized protein. (769 aa)
	A0A1L8H8J1	Uncharacterized protein. (463 aa)
	A0A1L8H8K5	Uncharacterized protein. (84 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	tab3	Uncharacterized protein. (692 aa)
	A0A1L8HHR6	Uncharacterized protein. (174 aa)
	birc2-2	Uncharacterized protein. (616 aa)
	rnf31	Uncharacterized protein. (1057 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	A0A1L8I1X3	NACHT domain-containing protein. (1304 aa)
	A0A1L8I1Y7	NACHT domain-containing protein. (1346 aa)
	A0A1L8I210	NACHT domain-containing protein. (1398 aa)
	A0A1L8I2M8	NACHT domain-containing protein. (1294 aa)
	optn	LOC100036954 protein. (526 aa)
	tnfrsf1a-2	Tumor necrosis factor receptor 1. (412 aa)
	LOC398025	TAB1. (498 aa)
	map3k7	MAP3K7 protein. (616 aa)
	rps27a	MGC81889 protein. (156 aa)
	uba52	MGC80109 protein. (128 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	rack1-2	Gnb2l1-prov protein. (317 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ET49	A0A1L8F178	A0A1L8ET49	A0A1L8F178	RING-type domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.634
A0A1L8ET49	A0A1L8F2K4	A0A1L8ET49	A0A1L8F2K4	RING-type domain-containing protein.	RING-type domain-containing protein.	0.643
A0A1L8ET49	A0A1L8F654	A0A1L8ET49	A0A1L8F654	RING-type domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.634
A0A1L8ET49	A0A1L8F7B5	A0A1L8ET49	A0A1L8F7B5	RING-type domain-containing protein.	RING-type domain-containing protein.	0.664
A0A1L8ET49	A0A1L8FTA7	A0A1L8ET49	A0A1L8FTA7	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.558
A0A1L8ET49	A0A1L8FXS1	A0A1L8ET49	A0A1L8FXS1	RING-type domain-containing protein.	Uncharacterized protein.	0.614
A0A1L8ET49	A0A1L8FZB6	A0A1L8ET49	A0A1L8FZB6	RING-type domain-containing protein.	RING-type domain-containing protein.	0.539
A0A1L8ET49	A0A1L8G0A4	A0A1L8ET49	A0A1L8G0A4	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.436
A0A1L8ET49	A0A1L8G366	A0A1L8ET49	A0A1L8G366	RING-type domain-containing protein.	Protein kinase domain-containing protein.	0.611
A0A1L8ET49	A0A1L8G5V1	A0A1L8ET49	A0A1L8G5V1	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.689
A0A1L8ET49	A0A1L8GER2	A0A1L8ET49	A0A1L8GER2	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.436
A0A1L8ET49	A0A1L8H8J1	A0A1L8ET49	A0A1L8H8J1	RING-type domain-containing protein.	Uncharacterized protein.	0.418
A0A1L8ET49	A0A1L8H8K5	A0A1L8ET49	A0A1L8H8K5	RING-type domain-containing protein.	Uncharacterized protein.	0.418
A0A1L8ET49	A0A1L8HCZ9	A0A1L8ET49	A0A1L8HCZ9	RING-type domain-containing protein.	Uncharacterized protein.	0.620
A0A1L8ET49	A0A1L8HX68	A0A1L8ET49	A0A1L8HX68	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.558
A0A1L8ET49	LOC398025	A0A1L8ET49	B7ZQK1	RING-type domain-containing protein.	TAB1.	0.601
A0A1L8ET49	Tnfaip3.S	A0A1L8ET49	A0A1L8G2B0	RING-type domain-containing protein.	Uncharacterized protein.	0.595
A0A1L8ET49	Traf2.S	A0A1L8ET49	A0A1L8F0Y1	RING-type domain-containing protein.	TNF receptor-associated factor.	0.634
A0A1L8ET49	cyld	A0A1L8ET49	A0A1L8GKP3	RING-type domain-containing protein.	Uncharacterized protein.	0.436
A0A1L8ET49	ikbkb	A0A1L8ET49	A0A1L8H261	RING-type domain-containing protein.	Uncharacterized protein.	0.565