64 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8EPM6	ANK_REP_REGION domain-containing protein. (400 aa)
	Brca1.L	Uncharacterized protein. (1582 aa)
	A0A1L8EWC7	Histone_H2A_C domain-containing protein; Belongs to the histone H2A family. (91 aa)
	bard1	Uncharacterized protein. (839 aa)
	A0A1L8F2E2	Uncharacterized protein. (308 aa)
	brcc3	MPN domain-containing protein. (261 aa)
	A0A1L8FCP4	NACHT domain-containing protein. (882 aa)
	A0A1L8FCP9	NACHT domain-containing protein. (896 aa)
	nlrp3	NACHT domain-containing protein. (882 aa)
	A0A1L8FCQ3	NACHT domain-containing protein. (883 aa)
	A0A1L8FCS0	NACHT domain-containing protein. (883 aa)
	Stambpl1.S	MPN domain-containing protein. (431 aa)
	stambpl1	MPN domain-containing protein. (431 aa)
	A0A1L8FJ15	MPN domain-containing protein. (385 aa)
	h2ax	Histone H2A; Belongs to the histone H2A family. (139 aa)
	A0A1L8FPV0	Uncharacterized protein. (145 aa)
	Stam.S	Uncharacterized protein. (504 aa)
	ankrd12	ANK_REP_REGION domain-containing protein. (1985 aa)
	A0A1L8FSQ8	Uncharacterized protein. (127 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	stam	Uncharacterized protein. (520 aa)
	A0A1L8FW69	Uncharacterized protein. (279 aa)
	A0A1L8FXP8	Uncharacterized protein. (349 aa)
	ankrd12-2	ANK_REP_REGION domain-containing protein. (1961 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	Bre.L	Uncharacterized protein. (404 aa)
	A0A1L8G727	Histone H2A; Belongs to the histone H2A family. (130 aa)
	A0A1L8G869	Uncharacterized protein. (166 aa)
	ankrd11	ANK_REP_REGION domain-containing protein. (2741 aa)
	A0A1L8GFI6	Uncharacterized protein. (76 aa)
	A0A1L8GFR7	SWIRM domain-containing protein. (80 aa)
	ep300	Uncharacterized protein. (2495 aa)
	A0A1L8GHN7	Uncharacterized protein. (175 aa)
	A0A1L8GKR7	Uncharacterized protein. (120 aa)
	mysm1	Uncharacterized protein. (828 aa)
	ep300-2	Uncharacterized protein. (2492 aa)
	Stambp.S	MPN domain-containing protein. (500 aa)
	A0A1L8GU05	Uncharacterized protein. (291 aa)
	A0A1L8GY09	RAP80_UIM domain-containing protein. (937 aa)
	A0A1L8GZK5	Uncharacterized protein. (348 aa)
	Stambp.L	MPN domain-containing protein. (416 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	A0A1L8HMW1	Uncharacterized protein. (149 aa)
	mpnd	MPN domain-containing protein. (469 aa)
	kxd1	KxDL domain-containing protein. (195 aa)
	abraxas1	MPN domain-containing protein. (408 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HRF5	Uncharacterized protein. (426 aa)
	A0A1L8HTB6	Uncharacterized protein. (198 aa)
	A0A1L8HVY7	Uncharacterized protein. (326 aa)
	Kxd1.L	KxDL domain-containing protein. (195 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	babam1	Uncharacterized protein. (328 aa)
	A0A1L8I1K3	Uncharacterized protein. (275 aa)
	A0A310TK05	Uncharacterized protein. (188 aa)
	A0A310TM74	Uncharacterized protein. (104 aa)
	A0A310TNN0	Uncharacterized protein. (183 aa)
	A0A310U704	Histone H2A; Belongs to the histone H2A family. (127 aa)
	A0A310U9I4	Uncharacterized protein. (485 aa)
	Hist2h2ab.S	Histone H2A; Belongs to the histone H2A family. (139 aa)
	rps27a	MGC81889 protein. (156 aa)
	uba52	MGC80109 protein. (128 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	psmd14	Psmd14-prov protein. (310 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EPM6	A0A1L8EWC7	A0A1L8EPM6	A0A1L8EWC7	ANK_REP_REGION domain-containing protein.	Histone_H2A_C domain-containing protein; Belongs to the histone H2A family.	0.498
A0A1L8EPM6	A0A1L8F2E2	A0A1L8EPM6	A0A1L8F2E2	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.649
A0A1L8EPM6	A0A1L8FPV0	A0A1L8EPM6	A0A1L8FPV0	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.733
A0A1L8EPM6	A0A1L8FSQ8	A0A1L8EPM6	A0A1L8FSQ8	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.556
A0A1L8EPM6	A0A1L8FTA7	A0A1L8EPM6	A0A1L8FTA7	ANK_REP_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.875
A0A1L8EPM6	A0A1L8FW69	A0A1L8EPM6	A0A1L8FW69	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.733
A0A1L8EPM6	A0A1L8FXP8	A0A1L8EPM6	A0A1L8FXP8	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.733
A0A1L8EPM6	A0A1L8G5V1	A0A1L8EPM6	A0A1L8G5V1	ANK_REP_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.901
A0A1L8EPM6	A0A1L8G727	A0A1L8EPM6	A0A1L8G727	ANK_REP_REGION domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.504
A0A1L8EPM6	A0A1L8G869	A0A1L8EPM6	A0A1L8G869	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.670
A0A1L8EPM6	A0A1L8GFI6	A0A1L8EPM6	A0A1L8GFI6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.790
A0A1L8EPM6	A0A1L8GFR7	A0A1L8EPM6	A0A1L8GFR7	ANK_REP_REGION domain-containing protein.	SWIRM domain-containing protein.	0.790
A0A1L8EPM6	A0A1L8GHN7	A0A1L8EPM6	A0A1L8GHN7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.670
A0A1L8EPM6	A0A1L8GKR7	A0A1L8EPM6	A0A1L8GKR7	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.670
A0A1L8EPM6	A0A1L8GU05	A0A1L8EPM6	A0A1L8GU05	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.556
A0A1L8EPM6	A0A1L8GY09	A0A1L8EPM6	A0A1L8GY09	ANK_REP_REGION domain-containing protein.	RAP80_UIM domain-containing protein.	0.877
A0A1L8EPM6	A0A1L8GZK5	A0A1L8EPM6	A0A1L8GZK5	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.670
A0A1L8EPM6	A0A1L8HCZ9	A0A1L8EPM6	A0A1L8HCZ9	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.781
A0A1L8EPM6	A0A1L8HMW1	A0A1L8EPM6	A0A1L8HMW1	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.556
A0A1L8EPM6	A0A1L8HTB6	A0A1L8EPM6	A0A1L8HTB6	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.556