STRINGSTRING
H2B H2B A0A1L8HHZ4 A0A1L8HHZ4 Rcbtb1.L Rcbtb1.L Ccna1.L Ccna1.L mre11 mre11 rnf169-2 rnf169-2 Nsd2.S Nsd2.S Ccna2.S Ccna2.S A0A1L8EPM6 A0A1L8EPM6 ube2i ube2i Brca1.L Brca1.L bard1 bard1 rmi2 rmi2 A0A1L8EXX7 A0A1L8EXX7 top3a top3a A0A1L8F2E2 A0A1L8F2E2 Exo1.S Exo1.S brcc3 brcc3 Dna2.S Dna2.S chek1 chek1 chek1-2 chek1-2 A0A1L8FPV0 A0A1L8FPV0 A0A1L8FQ56 A0A1L8FQ56 A0A1L8FQA5 A0A1L8FQA5 ankrd12 ankrd12 A0A1L8FSQ8 A0A1L8FSQ8 rbbp8 rbbp8 ube2v2 ube2v2 A0A1L8FW69 A0A1L8FW69 topbp1 topbp1 A0A1L8HMW1 A0A1L8HMW1 A0A1L8FXP8 A0A1L8FXP8 ankrd12-2 ankrd12-2 Rbbp8.L Rbbp8.L A0A1L8FYX8 A0A1L8FYX8 Nbn.L Nbn.L hist1h4a hist1h4a H2B-2 H2B-2 rnf8 rnf8 rnf168 rnf168 A0A1L8G6R5 A0A1L8G6R5 A0A1L8G6S1 A0A1L8G6S1 Bre.L Bre.L RNF8 RNF8 A0A1L8G6Z0 A0A1L8G6Z0 A0A1L8G795 A0A1L8G795 A0A1L8G869 A0A1L8G869 Atr.L Atr.L rnf168-2 rnf168-2 ankrd11 ankrd11 atrip atrip A0A1L8GHN7 A0A1L8GHN7 ppp4r2 ppp4r2 A0A1L8GKR7 A0A1L8GKR7 Rad26 Rad26 Ppp4r2.L Ppp4r2.L Rhno1.S Rhno1.S blm blm Tipin.S Tipin.S A0A1L8GSW6 A0A1L8GSW6 A0A1L8GU05 A0A1L8GU05 Ube2n.S Ube2n.S rad50 rad50 A0A1L8GWA8 A0A1L8GWA8 rad50-2 rad50-2 A0A1L8GY09 A0A1L8GY09 ube2n ube2n A0A1L8GZK5 A0A1L8GZK5 tp53bp1 tp53bp1 tipin tipin A0A1L8H1D5 A0A1L8H1D5 A0A1L8H4R2 A0A1L8H4R2 Cdk2.S Cdk2.S A0A1L8H9R2 A0A1L8H9R2 Rcbtb1.S Rcbtb1.S Ccna1.S Ccna1.S A0A1L8HBA4 A0A1L8HBA4 rnf169 rnf169 Recql4.L Recql4.L Rpa1.L Rpa1.L Rfc2.L Rfc2.L Cdk2.L Cdk2.L Pias4.S Pias4.S A0A1L8HPD7 A0A1L8HPD7 abraxas1 abraxas1 Rfc5.S Rfc5.S A0A1L8HRA7 A0A1L8HRA7 A0A1L8HRF5 A0A1L8HRF5 nsd2 nsd2 A0A1L8HTB6 A0A1L8HTB6 A0A1L8HVY7 A0A1L8HVY7 Pias4.L Pias4.L wrn wrn babam1 babam1 A0A1L8HYF4 A0A1L8HYF4 rad9b rad9b A0A1L8I1K3 A0A1L8I1K3 Rad17.L Rad17.L rad1 rad1 A0A310TK05 A0A310TK05 A0A310TM08 A0A310TM08 A0A310TM74 A0A310TM74 A0A310TML1 A0A310TML1 A0A310TNN0 A0A310TNN0 A0A310U368 A0A310U368 Hist1h4d.L Hist1h4d.L A0A310U9I4 A0A310U9I4 LOC100037190 LOC100037190 ccna2 ccna2 rfc3 rfc3 rpa3 rpa3 rpa3-2 rpa3-2 sirt6 sirt6 rfc4 rfc4 rfc5 rfc5 rcbtb2 rcbtb2 rad9a rad9a Hus1 Hus1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2BHistone H2B; Belongs to the histone H2B family. (126 aa)
A0A1L8HHZ4Uncharacterized protein. (1214 aa)
Rcbtb1.LBTB domain-containing protein. (600 aa)
Ccna1.LCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (421 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (711 aa)
rnf169-2Uncharacterized protein. (496 aa)
Nsd2.SUncharacterized protein. (1300 aa)
Ccna2.SCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (415 aa)
A0A1L8EPM6ANK_REP_REGION domain-containing protein. (400 aa)
ube2iUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
Brca1.LUncharacterized protein. (1582 aa)
bard1Uncharacterized protein. (839 aa)
rmi2Uncharacterized protein. (152 aa)
A0A1L8EXX7UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1022 aa)
A0A1L8F2E2Uncharacterized protein. (308 aa)
Exo1.SUncharacterized protein. (734 aa)
brcc3MPN domain-containing protein. (261 aa)
Dna2.SUncharacterized protein. (1053 aa)
chek1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (474 aa)
chek1-2Protein kinase domain-containing protein. (510 aa)
A0A1L8FPV0Uncharacterized protein. (145 aa)
A0A1L8FQ56Histone H2B; Belongs to the histone H2B family. (126 aa)
A0A1L8FQA5Histone H2B; Belongs to the histone H2B family. (126 aa)
ankrd12ANK_REP_REGION domain-containing protein. (1985 aa)
A0A1L8FSQ8Uncharacterized protein. (127 aa)
rbbp8Uncharacterized protein. (846 aa)
ube2v2UBIQUITIN_CONJUGAT_2 domain-containing protein. (145 aa)
A0A1L8FW69Uncharacterized protein. (279 aa)
topbp1Uncharacterized protein. (1573 aa)
A0A1L8HMW1Uncharacterized protein. (149 aa)
A0A1L8FXP8Uncharacterized protein. (349 aa)
ankrd12-2ANK_REP_REGION domain-containing protein. (1961 aa)
Rbbp8.LUncharacterized protein. (856 aa)
A0A1L8FYX8UBIQUITIN_CONJUGAT_2 domain-containing protein. (137 aa)
Nbn.LNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (762 aa)
hist1h4aHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
H2B-2Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (233 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (540 aa)
rnf168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (554 aa)
A0A1L8G6R5Histone H2B; Belongs to the histone H2B family. (347 aa)
A0A1L8G6S1Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (238 aa)
Bre.LUncharacterized protein. (404 aa)
RNF8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (532 aa)
A0A1L8G6Z0Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A1L8G795Histone H2B; Belongs to the histone H2B family. (126 aa)
A0A1L8G869Uncharacterized protein. (166 aa)
Atr.LUncharacterized protein; Belongs to the PI3/PI4-kinase family. (2654 aa)
rnf168-2E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (565 aa)
ankrd11ANK_REP_REGION domain-containing protein. (2741 aa)
atripUncharacterized protein. (801 aa)
A0A1L8GHN7Uncharacterized protein. (175 aa)
ppp4r2Uncharacterized protein. (398 aa)
A0A1L8GKR7Uncharacterized protein. (120 aa)
Rad26Uncharacterized protein. (798 aa)
Ppp4r2.LUncharacterized protein. (403 aa)
Rhno1.SUncharacterized protein. (252 aa)
blmUncharacterized protein. (1368 aa)
Tipin.STIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (361 aa)
A0A1L8GSW6Uncharacterized protein. (2175 aa)
A0A1L8GU05Uncharacterized protein. (291 aa)
Ube2n.SUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
rad50Zinc-hook domain-containing protein. (1311 aa)
A0A1L8GWA8Uncharacterized protein. (209 aa)
rad50-2Zinc-hook domain-containing protein. (1312 aa)
A0A1L8GY09RAP80_UIM domain-containing protein. (937 aa)
ube2nUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
A0A1L8GZK5Uncharacterized protein. (348 aa)
tp53bp1Uncharacterized protein. (2179 aa)
tipinTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (362 aa)
A0A1L8H1D5Uncharacterized protein. (1367 aa)
A0A1L8H4R2Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (584 aa)
Cdk2.SProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (297 aa)
A0A1L8H9R2Uncharacterized protein. (1288 aa)
Rcbtb1.SBTB domain-containing protein. (600 aa)
Ccna1.SCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (418 aa)
A0A1L8HBA4Uncharacterized protein. (103 aa)
rnf169Uncharacterized protein. (483 aa)
Recql4.LUncharacterized protein. (1504 aa)
Rpa1.LReplication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (609 aa)
Rfc2.LAAA domain-containing protein. (359 aa)
Cdk2.LProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (297 aa)
Pias4.SUncharacterized protein. (543 aa)
A0A1L8HPD7Uncharacterized protein. (341 aa)
abraxas1MPN domain-containing protein. (408 aa)
Rfc5.SAAA domain-containing protein. (335 aa)
A0A1L8HRA7Uncharacterized protein. (177 aa)
A0A1L8HRF5Uncharacterized protein. (426 aa)
nsd2Uncharacterized protein. (1300 aa)
A0A1L8HTB6Uncharacterized protein. (198 aa)
A0A1L8HVY7Uncharacterized protein. (326 aa)
Pias4.LUncharacterized protein. (544 aa)
wrnUncharacterized protein. (1434 aa)
babam1Uncharacterized protein. (328 aa)
A0A1L8HYF4DUF1767 domain-containing protein. (512 aa)
rad9bCell cycle checkpoint control protein; Belongs to the rad9 family. (483 aa)
A0A1L8I1K3Uncharacterized protein. (275 aa)
Rad17.LUncharacterized protein. (674 aa)
rad1Uncharacterized protein. (283 aa)
A0A310TK05Uncharacterized protein. (188 aa)
A0A310TM08Histone H2B; Belongs to the histone H2B family. (126 aa)
A0A310TM74Uncharacterized protein. (104 aa)
A0A310TML1CENP-T_C domain-containing protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (43 aa)
A0A310TNN0Uncharacterized protein. (183 aa)
A0A310U368Histone H2B; Belongs to the histone H2B family. (94 aa)
Hist1h4d.LHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
A0A310U9I4Uncharacterized protein. (485 aa)
LOC100037190LOC100037190 protein. (331 aa)
ccna2MGC130969 protein; Belongs to the cyclin family. (415 aa)
rfc3MGC115007 protein. (356 aa)
rpa3LOC495401 protein. (121 aa)
rpa3-2Rpa3-prov protein. (121 aa)
sirt6MGC82564 protein. (331 aa)
rfc4Replication factor C p37 subunit. (363 aa)
rfc5Rfc5-prov protein. (335 aa)
rcbtb2Chc1l-prov protein. (526 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (377 aa)
Hus1Checkpoint protein; Belongs to the HUS1 family. (282 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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