66 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Socs3.S	Uncharacterized protein. (250 aa)
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	ciita	NACHT domain-containing protein. (1047 aa)
	Gbp7.S	GBP_C domain-containing protein. (336 aa)
	Gbp4.S	GB1/RHD3-type G domain-containing protein. (744 aa)
	A0A1L8ERM4	GB1/RHD3-type G domain-containing protein. (295 aa)
	A0A1L8ET99	IRF tryptophan pentad repeat domain-containing protein. (455 aa)
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	A0A1L8EXF3	NACHT domain-containing protein. (1062 aa)
	atl1	GB1/RHD3-type G domain-containing protein. (558 aa)
	Mid2.L	Uncharacterized protein. (687 aa)
	atl1-2	GB1/RHD3-type G domain-containing protein. (558 aa)
	ptpn6	Uncharacterized protein. (687 aa)
	Camk2g.S	Protein kinase domain-containing protein. (662 aa)
	socs3l	Uncharacterized protein. (215 aa)
	A0A1L8FHF5	Uncharacterized protein. (475 aa)
	A0A1L8FJZ5	Protein kinase domain-containing protein. (654 aa)
	A0A1L8FND6	Uncharacterized protein. (232 aa)
	A0A1L8FNS5	GB1/RHD3-type G domain-containing protein. (619 aa)
	Gbp1.L	GB1/RHD3-type G domain-containing protein. (594 aa)
	A0A1L8FNW2	GB1/RHD3-type G domain-containing protein. (665 aa)
	A0A1L8FSA3	Uncharacterized protein. (676 aa)
	A0A1L8FXT5	IRF tryptophan pentad repeat domain-containing protein. (443 aa)
	A0A1L8FYE8	Tyrosine-protein phosphatase non-receptor type. (462 aa)
	A0A1L8G1T9	GB1/RHD3-type G domain-containing protein. (571 aa)
	A0A1L8G2F8	Uncharacterized protein. (459 aa)
	A0A1L8G3B4	IRF tryptophan pentad repeat domain-containing protein. (497 aa)
	irf6	IRF tryptophan pentad repeat domain-containing protein. (460 aa)
	atl2	GB1/RHD3-type G domain-containing protein. (569 aa)
	Irf6.2.L	IRF tryptophan pentad repeat domain-containing protein. (459 aa)
	A0A1L8G9D8	IRF tryptophan pentad repeat domain-containing protein. (214 aa)
	irf8	IRF tryptophan pentad repeat domain-containing protein. (411 aa)
	A0A1L8GJR8	GB1/RHD3-type G domain-containing protein. (522 aa)
	Irf8.L	IRF tryptophan pentad repeat domain-containing protein. (411 aa)
	A0A1L8GRD5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (478 aa)
	A0A1L8GRX1	Protein kinase domain-containing protein. (571 aa)
	A0A1L8GS09	Protein kinase domain-containing protein. (51 aa)
	irf5	IRF tryptophan pentad repeat domain-containing protein. (518 aa)
	A0A1L8GUI6	Uncharacterized protein. (183 aa)
	Irf1.S	Interferon regulatory factor. (345 aa)
	ifng	Uncharacterized protein. (182 aa)
	camk2b	Protein kinase domain-containing protein. (623 aa)
	A0A1L8H6I9	Uncharacterized protein. (668 aa)
	A0A1L8HBL9	Uncharacterized protein. (753 aa)
	trim45	Uncharacterized protein. (548 aa)
	A0A1L8HCC4	Uncharacterized protein. (141 aa)
	A0A1L8HCI2	Uncharacterized protein. (399 aa)
	A0A1L8HCJ2	Fibronectin type-III domain-containing protein. (312 aa)
	A0A1L8HJV3	Uncharacterized protein. (740 aa)
	irf2	IRF tryptophan pentad repeat domain-containing protein. (436 aa)
	A0A1L8HM27	Protein kinase domain-containing protein. (396 aa)
	trim2	Uncharacterized protein. (744 aa)
	A0A1L8HUU6	Protein kinase domain-containing protein. (508 aa)
	A0A310TWM2	GBP_C domain-containing protein. (153 aa)
	A0A310U5Y8	GBP_C domain-containing protein. (203 aa)
	Gbp6.L	GB1/RHD3-type G domain-containing protein. (459 aa)
	socs1	Suppressor of cytokine signaling. (211 aa)
	mid1	Midline 1. (668 aa)
	ptpn6-2	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (587 aa)
	irf2-2	Interferon regulatory factor. (347 aa)
	irf5-2	LOC494760 protein. (517 aa)
	ptpn2	Tyrosine-protein phosphatase non-receptor type. (468 aa)
	socs1-2	MGC80232 protein. (211 aa)
	trim2-2	MGC80218 protein. (748 aa)
	socs3	MGC81248 protein. (199 aa)
	irf1	Interferon regulatory factor. (298 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ERM4	A0A310TWM2	A0A1L8ERM4	A0A310TWM2	GB1/RHD3-type G domain-containing protein.	GBP_C domain-containing protein.	0.450
A0A1L8ERM4	Gbp7.S	A0A1L8ERM4	A0A1L8ERD0	GB1/RHD3-type G domain-containing protein.	GBP_C domain-containing protein.	0.476
A0A1L8ET99	Irf1.S	A0A1L8ET99	A0A1L8GVE7	IRF tryptophan pentad repeat domain-containing protein.	Interferon regulatory factor.	0.567
A0A1L8ET99	irf1	A0A1L8ET99	Q6PB00	IRF tryptophan pentad repeat domain-containing protein.	Interferon regulatory factor.	0.560
A0A1L8FJZ5	Camk2g.S	A0A1L8FJZ5	A0A1L8FF53	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.900
A0A1L8FND6	A0A1L8GUI6	A0A1L8FND6	A0A1L8GUI6	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A1L8FND6	A0A1L8HCI2	A0A1L8FND6	A0A1L8HCI2	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FND6	A0A1L8HCJ2	A0A1L8FND6	A0A1L8HCJ2	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.448
A0A1L8FND6	ifng	A0A1L8FND6	A0A1L8GYI9	Uncharacterized protein.	Uncharacterized protein.	0.517
A0A1L8FND6	socs1	A0A1L8FND6	C0LEJ4	Uncharacterized protein.	Suppressor of cytokine signaling.	0.429
A0A1L8FSA3	Irf1.S	A0A1L8FSA3	A0A1L8GVE7	Uncharacterized protein.	Interferon regulatory factor.	0.497
A0A1L8FSA3	irf1	A0A1L8FSA3	Q6PB00	Uncharacterized protein.	Interferon regulatory factor.	0.497
A0A1L8FXT5	Irf1.S	A0A1L8FXT5	A0A1L8GVE7	IRF tryptophan pentad repeat domain-containing protein.	Interferon regulatory factor.	0.530
A0A1L8FXT5	irf1	A0A1L8FXT5	Q6PB00	IRF tryptophan pentad repeat domain-containing protein.	Interferon regulatory factor.	0.525
A0A1L8G2F8	A0A1L8GUI6	A0A1L8G2F8	A0A1L8GUI6	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1L8G2F8	A0A1L8HCI2	A0A1L8G2F8	A0A1L8HCI2	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A1L8G2F8	A0A1L8HCJ2	A0A1L8G2F8	A0A1L8HCJ2	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.985
A0A1L8G2F8	ifng	A0A1L8G2F8	A0A1L8GYI9	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A1L8G2F8	socs1	A0A1L8G2F8	C0LEJ4	Uncharacterized protein.	Suppressor of cytokine signaling.	0.403
A0A1L8G2F8	socs1-2	A0A1L8G2F8	Q6GQ99	Uncharacterized protein.	MGC80232 protein.	0.403