10 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mst1	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily. (718 aa)
	A0A1L8F3U3	Uncharacterized protein. (430 aa)
	A0A1L8F481	Uncharacterized protein. (95 aa)
	A0A1L8F486	Uncharacterized protein. (123 aa)
	spint2	Uncharacterized protein. (394 aa)
	A0A1L8FB23	Uncharacterized protein. (511 aa)
	Hpn.S	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (386 aa)
	Mst1.S	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily. (716 aa)
	A0A1L8GHC7	Uncharacterized protein. (1368 aa)
	A0A1L8GP86	Uncharacterized protein. (1303 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F3U3	Mst1.S	A0A1L8F3U3	A0A1L8GHB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.694
A0A1L8F3U3	mst1	A0A1L8F3U3	A0A1L8GP52	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.694
A0A1L8F481	Hpn.S	A0A1L8F481	A0A1L8FHT6	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.541
A0A1L8F481	Mst1.S	A0A1L8F481	A0A1L8GHB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.653
A0A1L8F481	mst1	A0A1L8F481	A0A1L8GP52	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.653
A0A1L8F486	Hpn.S	A0A1L8F486	A0A1L8FHT6	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.541
A0A1L8F486	Mst1.S	A0A1L8F486	A0A1L8GHB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.653
A0A1L8F486	mst1	A0A1L8F486	A0A1L8GP52	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.653
A0A1L8FB23	Hpn.S	A0A1L8FB23	A0A1L8FHT6	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.541
A0A1L8FB23	Mst1.S	A0A1L8FB23	A0A1L8GHB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.653
A0A1L8FB23	mst1	A0A1L8FB23	A0A1L8GP52	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.653
A0A1L8GHC7	A0A1L8GP86	A0A1L8GHC7	A0A1L8GP86	Uncharacterized protein.	Uncharacterized protein.	0.698
A0A1L8GHC7	Hpn.S	A0A1L8GHC7	A0A1L8FHT6	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.591
A0A1L8GHC7	Mst1.S	A0A1L8GHC7	A0A1L8GHB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.973
A0A1L8GHC7	mst1	A0A1L8GHC7	A0A1L8GP52	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.973
A0A1L8GP86	A0A1L8GHC7	A0A1L8GP86	A0A1L8GHC7	Uncharacterized protein.	Uncharacterized protein.	0.698
A0A1L8GP86	Hpn.S	A0A1L8GP86	A0A1L8FHT6	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.591
A0A1L8GP86	Mst1.S	A0A1L8GP86	A0A1L8GHB0	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.973
A0A1L8GP86	mst1	A0A1L8GP86	A0A1L8GP52	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase S1 family. Plasminogen subfamily.	0.973
Hpn.S	A0A1L8F481	A0A1L8FHT6	A0A1L8F481	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.541