11 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ubc-2	Ubc-prov protein. (609 aa)
	usp7	Uncharacterized protein; Belongs to the peptidase C19 family. (1123 aa)
	usp7-2	Usp7; Belongs to the peptidase C19 family. (1124 aa)
	A0A1L8F2K4	RING-type domain-containing protein. (107 aa)
	A0A1L8F7B5	RING-type domain-containing protein. (488 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	kxd1	KxDL domain-containing protein. (195 aa)
	ubc	Uncharacterized protein. (533 aa)
	Kxd1.L	KxDL domain-containing protein. (195 aa)
	rps27a	MGC81889 protein. (156 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F2K4	A0A1L8G5V1	A0A1L8F2K4	A0A1L8G5V1	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.722
A0A1L8F2K4	A0A1L8HCZ9	A0A1L8F2K4	A0A1L8HCZ9	RING-type domain-containing protein.	Uncharacterized protein.	0.694
A0A1L8F2K4	rps27a	A0A1L8F2K4	Q6GMC1	RING-type domain-containing protein.	MGC81889 protein.	0.722
A0A1L8F2K4	ubc	A0A1L8F2K4	A0A1L8HQK4	RING-type domain-containing protein.	Uncharacterized protein.	0.694
A0A1L8F2K4	ubc-2	A0A1L8F2K4	Q7SY79	RING-type domain-containing protein.	Ubc-prov protein.	0.694
A0A1L8F7B5	A0A1L8G5V1	A0A1L8F7B5	A0A1L8G5V1	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.722
A0A1L8F7B5	A0A1L8HCZ9	A0A1L8F7B5	A0A1L8HCZ9	RING-type domain-containing protein.	Uncharacterized protein.	0.694
A0A1L8F7B5	rps27a	A0A1L8F7B5	Q6GMC1	RING-type domain-containing protein.	MGC81889 protein.	0.722
A0A1L8F7B5	ubc	A0A1L8F7B5	A0A1L8HQK4	RING-type domain-containing protein.	Uncharacterized protein.	0.694
A0A1L8F7B5	ubc-2	A0A1L8F7B5	Q7SY79	RING-type domain-containing protein.	Ubc-prov protein.	0.694
A0A1L8G5V1	A0A1L8F2K4	A0A1L8G5V1	A0A1L8F2K4	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.722
A0A1L8G5V1	A0A1L8F7B5	A0A1L8G5V1	A0A1L8F7B5	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.722
A0A1L8G5V1	A0A1L8HCZ9	A0A1L8G5V1	A0A1L8HCZ9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.935
A0A1L8G5V1	Kxd1.L	A0A1L8G5V1	A0A1L8HX51	Ubiquitin-like domain-containing protein.	KxDL domain-containing protein.	0.715
A0A1L8G5V1	kxd1	A0A1L8G5V1	A0A1L8HNT9	Ubiquitin-like domain-containing protein.	KxDL domain-containing protein.	0.715
A0A1L8G5V1	rps27a	A0A1L8G5V1	Q6GMC1	Ubiquitin-like domain-containing protein.	MGC81889 protein.	0.900
A0A1L8G5V1	ubc	A0A1L8G5V1	A0A1L8HQK4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.934
A0A1L8G5V1	ubc-2	A0A1L8G5V1	Q7SY79	Ubiquitin-like domain-containing protein.	Ubc-prov protein.	0.934
A0A1L8G5V1	usp7	A0A1L8G5V1	A0A1L8EQ22	Ubiquitin-like domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.951
A0A1L8G5V1	usp7-2	A0A1L8G5V1	A0A1L8EXJ7	Ubiquitin-like domain-containing protein.	Usp7; Belongs to the peptidase C19 family.	0.951