27 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tax1bp1	Uncharacterized protein. (838 aa)
	vwc2l	VWFC domain-containing protein. (222 aa)
	vwc2l-2	VWFC domain-containing protein. (222 aa)
	rnf216	Uncharacterized protein. (864 aa)
	A0A1L8EZF8	OTU domain-containing protein. (415 aa)
	A0A1L8F5F3	OTU domain-containing protein. (493 aa)
	irf3	IRF tryptophan pentad repeat domain-containing protein. (471 aa)
	nlrx1	NACHT domain-containing protein. (953 aa)
	Irf3.L	IRF tryptophan pentad repeat domain-containing protein. (466 aa)
	rnf125	Uncharacterized protein. (224 aa)
	vwc2	VWFC domain-containing protein. (324 aa)
	rnf125-2	Uncharacterized protein. (222 aa)
	Tnfaip3.S	Uncharacterized protein. (781 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8GUL9	Protein kinase domain-containing protein. (690 aa)
	tbk1	Protein kinase domain-containing protein. (725 aa)
	ikbke	Protein kinase domain-containing protein. (719 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	ikbke-2	Protein kinase domain-containing protein. (719 aa)
	A0A1L8HKI7	CARD_2 domain-containing protein. (384 aa)
	kxd1	KxDL domain-containing protein. (195 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HSE4	CARD_2 domain-containing protein. (620 aa)
	Kxd1.L	KxDL domain-containing protein. (195 aa)
	tax1bp1-2	Tax1 binding protein 1. (840 aa)
	rps27a	MGC81889 protein. (156 aa)
	ubc-2	Ubc-prov protein. (609 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EZF8	A0A1L8G5V1	A0A1L8EZF8	A0A1L8G5V1	OTU domain-containing protein.	Ubiquitin-like domain-containing protein.	0.849
A0A1L8EZF8	A0A1L8HCZ9	A0A1L8EZF8	A0A1L8HCZ9	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8EZF8	rps27a	A0A1L8EZF8	Q6GMC1	OTU domain-containing protein.	MGC81889 protein.	0.849
A0A1L8EZF8	ubc	A0A1L8EZF8	A0A1L8HQK4	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8EZF8	ubc-2	A0A1L8EZF8	Q7SY79	OTU domain-containing protein.	Ubc-prov protein.	0.715
A0A1L8F5F3	A0A1L8G5V1	A0A1L8F5F3	A0A1L8G5V1	OTU domain-containing protein.	Ubiquitin-like domain-containing protein.	0.849
A0A1L8F5F3	A0A1L8HCZ9	A0A1L8F5F3	A0A1L8HCZ9	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8F5F3	rps27a	A0A1L8F5F3	Q6GMC1	OTU domain-containing protein.	MGC81889 protein.	0.849
A0A1L8F5F3	ubc	A0A1L8F5F3	A0A1L8HQK4	OTU domain-containing protein.	Uncharacterized protein.	0.715
A0A1L8F5F3	ubc-2	A0A1L8F5F3	Q7SY79	OTU domain-containing protein.	Ubc-prov protein.	0.715
A0A1L8G5V1	A0A1L8EZF8	A0A1L8G5V1	A0A1L8EZF8	Ubiquitin-like domain-containing protein.	OTU domain-containing protein.	0.849
A0A1L8G5V1	A0A1L8F5F3	A0A1L8G5V1	A0A1L8F5F3	Ubiquitin-like domain-containing protein.	OTU domain-containing protein.	0.849
A0A1L8G5V1	A0A1L8GUL9	A0A1L8G5V1	A0A1L8GUL9	Ubiquitin-like domain-containing protein.	Protein kinase domain-containing protein.	0.584
A0A1L8G5V1	A0A1L8HCZ9	A0A1L8G5V1	A0A1L8HCZ9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.935
A0A1L8G5V1	A0A1L8HKI7	A0A1L8G5V1	A0A1L8HKI7	Ubiquitin-like domain-containing protein.	CARD_2 domain-containing protein.	0.888
A0A1L8G5V1	Irf3.L	A0A1L8G5V1	A0A1L8FNA8	Ubiquitin-like domain-containing protein.	IRF tryptophan pentad repeat domain-containing protein.	0.448
A0A1L8G5V1	Kxd1.L	A0A1L8G5V1	A0A1L8HX51	Ubiquitin-like domain-containing protein.	KxDL domain-containing protein.	0.715
A0A1L8G5V1	Tnfaip3.S	A0A1L8G5V1	A0A1L8G2B0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.961
A0A1L8G5V1	ikbke	A0A1L8G5V1	A0A1L8H797	Ubiquitin-like domain-containing protein.	Protein kinase domain-containing protein.	0.584
A0A1L8G5V1	ikbke-2	A0A1L8G5V1	A0A1L8HES5	Ubiquitin-like domain-containing protein.	Protein kinase domain-containing protein.	0.584