19 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8HZL4	Protein kinase domain-containing protein. (523 aa)
	A0A1L8F260	TIR domain-containing protein; Belongs to the Toll-like receptor family. (840 aa)
	Ripk3.S	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (425 aa)
	ripk1	Uncharacterized protein. (666 aa)
	A0A1L8FTB8	ML domain-containing protein. (127 aa)
	A0A1L8FXS1	Uncharacterized protein. (581 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	ube2d4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	rps27a	MGC81889 protein. (156 aa)
	A0A1L8GX03	Uncharacterized protein. (467 aa)
	sarm1	Uncharacterized protein. (701 aa)
	birc2	Uncharacterized protein. (609 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	sarm1-2	Uncharacterized protein. (719 aa)
	birc2-2	Uncharacterized protein. (616 aa)
	ube2d3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	ubc	Uncharacterized protein. (533 aa)
	ube2d1	Ube2d2-prov protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F260	A0A1L8FTB8	A0A1L8F260	A0A1L8FTB8	TIR domain-containing protein; Belongs to the Toll-like receptor family.	ML domain-containing protein.	0.996
A0A1L8F260	A0A1L8FXS1	A0A1L8F260	A0A1L8FXS1	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.808
A0A1L8F260	A0A1L8G5V1	A0A1L8F260	A0A1L8G5V1	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Ubiquitin-like domain-containing protein.	0.443
A0A1L8F260	A0A1L8GX03	A0A1L8F260	A0A1L8GX03	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.895
A0A1L8F260	A0A1L8HCZ9	A0A1L8F260	A0A1L8HCZ9	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.419
A0A1L8F260	A0A1L8HZL4	A0A1L8F260	A0A1L8HZL4	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Protein kinase domain-containing protein.	0.588
A0A1L8F260	Ripk3.S	A0A1L8F260	A0A1L8FBN5	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.630
A0A1L8F260	birc2	A0A1L8F260	A0A1L8HAT1	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.920
A0A1L8F260	birc2-2	A0A1L8F260	A0A1L8HJ69	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.920
A0A1L8F260	ripk1	A0A1L8F260	A0A1L8FSB1	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.808
A0A1L8F260	rps27a	A0A1L8F260	Q6GMC1	TIR domain-containing protein; Belongs to the Toll-like receptor family.	MGC81889 protein.	0.443
A0A1L8F260	sarm1	A0A1L8F260	A0A1L8H506	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.624
A0A1L8F260	sarm1-2	A0A1L8F260	A0A1L8HDE7	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.624
A0A1L8F260	ubc	A0A1L8F260	A0A1L8HQK4	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Uncharacterized protein.	0.419
A0A1L8F260	ubc-2	A0A1L8F260	Q7SY79	TIR domain-containing protein; Belongs to the Toll-like receptor family.	Ubc-prov protein.	0.419
A0A1L8FTB8	A0A1L8F260	A0A1L8FTB8	A0A1L8F260	ML domain-containing protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.996
A0A1L8FTB8	A0A1L8FXS1	A0A1L8FTB8	A0A1L8FXS1	ML domain-containing protein.	Uncharacterized protein.	0.571
A0A1L8FTB8	A0A1L8G5V1	A0A1L8FTB8	A0A1L8G5V1	ML domain-containing protein.	Ubiquitin-like domain-containing protein.	0.553
A0A1L8FTB8	A0A1L8GX03	A0A1L8FTB8	A0A1L8GX03	ML domain-containing protein.	Uncharacterized protein.	0.851
A0A1L8FTB8	A0A1L8HCZ9	A0A1L8FTB8	A0A1L8HCZ9	ML domain-containing protein.	Uncharacterized protein.	0.544