27 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8H8K5	Uncharacterized protein. (84 aa)
	tab3	Uncharacterized protein. (692 aa)
	Traf6.S	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8G366	Protein kinase domain-containing protein. (588 aa)
	A0A1L8FTB8	ML domain-containing protein. (127 aa)
	A0A1L8F4W7	TIR domain-containing protein. (724 aa)
	A0A1L8F260	TIR domain-containing protein; Belongs to the Toll-like receptor family. (840 aa)
	A0A1L8EW93	Uncharacterized protein. (793 aa)
	A0A1L8EP79	Uncharacterized protein. (788 aa)
	kxd1	KxDL domain-containing protein. (195 aa)
	ubc	Uncharacterized protein. (533 aa)
	Kxd1.L	KxDL domain-containing protein. (195 aa)
	sarm1-2	Uncharacterized protein. (719 aa)
	A0A1L8H8N6	RanBP2-type domain-containing protein. (81 aa)
	sarm1	Uncharacterized protein. (701 aa)
	A0A1L8GX03	Uncharacterized protein. (467 aa)
	irak2	Protein kinase domain-containing protein. (672 aa)
	LOC398025	TAB1. (498 aa)
	map3k7	MAP3K7 protein. (616 aa)
	rps27a	MGC81889 protein. (156 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	Traf6.L	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
	A0A1L8GHN8	Protein kinase domain-containing protein. (522 aa)
	A0A1L8H8J1	Uncharacterized protein. (463 aa)
	tab1	PPM-type phosphatase domain-containing protein. (500 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EP79	A0A1L8EW93	A0A1L8EP79	A0A1L8EW93	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8EP79	A0A1L8F260	A0A1L8EP79	A0A1L8F260	Uncharacterized protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.844
A0A1L8EP79	A0A1L8FTB8	A0A1L8EP79	A0A1L8FTB8	Uncharacterized protein.	ML domain-containing protein.	0.494
A0A1L8EP79	A0A1L8G5V1	A0A1L8EP79	A0A1L8G5V1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.579
A0A1L8EP79	A0A1L8GHN8	A0A1L8EP79	A0A1L8GHN8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.557
A0A1L8EP79	A0A1L8H8J1	A0A1L8EP79	A0A1L8H8J1	Uncharacterized protein.	Uncharacterized protein.	0.773
A0A1L8EP79	A0A1L8H8K5	A0A1L8EP79	A0A1L8H8K5	Uncharacterized protein.	Uncharacterized protein.	0.773
A0A1L8EP79	A0A1L8H8N6	A0A1L8EP79	A0A1L8H8N6	Uncharacterized protein.	RanBP2-type domain-containing protein.	0.483
A0A1L8EP79	A0A1L8HCZ9	A0A1L8EP79	A0A1L8HCZ9	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A1L8EP79	LOC398025	A0A1L8EP79	B7ZQK1	Uncharacterized protein.	TAB1.	0.905
A0A1L8EP79	Traf6.L	A0A1L8EP79	A0A1L8GIM0	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.904
A0A1L8EP79	Traf6.S	A0A1L8EP79	A0A1L8GE35	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.904
A0A1L8EP79	irak2	A0A1L8EP79	A0A1L8GPJ0	Uncharacterized protein.	Protein kinase domain-containing protein.	0.557
A0A1L8EP79	rps27a	A0A1L8EP79	Q6GMC1	Uncharacterized protein.	MGC81889 protein.	0.579
A0A1L8EP79	tab1	A0A1L8EP79	A0A1L8GGZ6	Uncharacterized protein.	PPM-type phosphatase domain-containing protein.	0.905
A0A1L8EP79	tab3	A0A1L8EP79	A0A1L8HGJ3	Uncharacterized protein.	Uncharacterized protein.	0.773
A0A1L8EP79	ubc	A0A1L8EP79	A0A1L8HQK4	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A1L8EP79	ubc-2	A0A1L8EP79	Q7SY79	Uncharacterized protein.	Ubc-prov protein.	0.522
A0A1L8EW93	A0A1L8EP79	A0A1L8EW93	A0A1L8EP79	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8EW93	A0A1L8F260	A0A1L8EW93	A0A1L8F260	Uncharacterized protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.844