47 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Sla2.S	Uncharacterized protein. (266 aa)
	grb2	Uncharacterized protein. (229 aa)
	Sla2.L	Uncharacterized protein. (266 aa)
	grb2-2	Uncharacterized protein. (229 aa)
	akt1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (481 aa)
	MGC78893	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (485 aa)
	akt2	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (486 aa)
	A0A1L8FA58	Non-specific serine/threonine protein kinase. (516 aa)
	kras	Uncharacterized protein. (186 aa)
	A0A1L8FH73	Uncharacterized protein. (243 aa)
	ptprh	Uncharacterized protein. (1051 aa)
	Syk.S	Tyrosine-protein kinase. (632 aa)
	kras-3	LOC397771 protein. (186 aa)
	hras	Small G-protein H-Ras. (189 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	rps27a	MGC81889 protein. (156 aa)
	socs6-2	Socs6-prov protein. (533 aa)
	kras-2	Uncharacterized protein. (187 aa)
	krasl	Uncharacterized protein. (187 aa)
	A0A310UBU8	Uncharacterized protein. (244 aa)
	A0A310TP32	Uncharacterized protein. (202 aa)
	sh2b3	Uncharacterized protein. (618 aa)
	syk	Tyrosine-protein kinase. (605 aa)
	Sh2b3.S	SH2 domain-containing protein. (617 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8FNH3	Uncharacterized protein. (249 aa)
	ptprh-2	Uncharacterized protein. (1228 aa)
	socs6	Uncharacterized protein. (533 aa)
	sos1	Uncharacterized protein. (1325 aa)
	A0A1L8G3Z7	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1065 aa)
	A0A1L8G402	Uncharacterized protein. (176 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	sos1-2	Uncharacterized protein. (1325 aa)
	A0A1L8GA65	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1009 aa)
	grap2	Uncharacterized protein. (303 aa)
	A0A1L8GI50	Uncharacterized protein. (768 aa)
	grap2-2	Uncharacterized protein. (301 aa)
	csde1	Uncharacterized protein. (833 aa)
	A0A1L8H940	Uncharacterized protein. (137 aa)
	A0A1L8HAQ5	Uncharacterized protein. (779 aa)
	gab2	PH domain-containing protein. (673 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	nras	Uncharacterized protein. (189 aa)
	A0A1L8HE12	Uncharacterized protein. (122 aa)
	Csde1.L	Uncharacterized protein. (780 aa)
	A0A1L8HJ12	Uncharacterized protein. (781 aa)
	gab2-2	PH domain-containing protein. (677 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8FA58	A0A1L8G3Z7	A0A1L8FA58	A0A1L8G3Z7	Non-specific serine/threonine protein kinase.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.627
A0A1L8FA58	A0A1L8GA65	A0A1L8FA58	A0A1L8GA65	Non-specific serine/threonine protein kinase.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.627
A0A1L8FH73	A0A1L8G402	A0A1L8FH73	A0A1L8G402	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FH73	A0A1L8G5V1	A0A1L8FH73	A0A1L8G5V1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.964
A0A1L8FH73	A0A1L8GI50	A0A1L8FH73	A0A1L8GI50	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FH73	A0A1L8HAQ5	A0A1L8FH73	A0A1L8HAQ5	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A1L8FH73	A0A1L8HCZ9	A0A1L8FH73	A0A1L8HCZ9	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A1L8FH73	A0A1L8HJ12	A0A1L8FH73	A0A1L8HJ12	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A1L8FH73	A0A310TP32	A0A1L8FH73	A0A310TP32	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FH73	A0A310UBU8	A0A1L8FH73	A0A310UBU8	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FH73	ptprh	A0A1L8FH73	A0A1L8FH80	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FH73	ptprh-2	A0A1L8FH73	A0A1L8FNI4	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FH73	rps27a	A0A1L8FH73	Q6GMC1	Uncharacterized protein.	MGC81889 protein.	0.964
A0A1L8FH73	syk	A0A1L8FH73	A0A1L8HYI7	Uncharacterized protein.	Tyrosine-protein kinase.	0.445
A0A1L8FH73	ubc	A0A1L8FH73	A0A1L8HQK4	Uncharacterized protein.	Uncharacterized protein.	0.792
A0A1L8FH73	ubc-2	A0A1L8FH73	Q7SY79	Uncharacterized protein.	Ubc-prov protein.	0.792
A0A1L8FNH3	A0A1L8G402	A0A1L8FNH3	A0A1L8G402	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FNH3	A0A1L8G5V1	A0A1L8FNH3	A0A1L8G5V1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.964
A0A1L8FNH3	A0A1L8GI50	A0A1L8FNH3	A0A1L8GI50	Uncharacterized protein.	Uncharacterized protein.	0.448
A0A1L8FNH3	A0A1L8HAQ5	A0A1L8FNH3	A0A1L8HAQ5	Uncharacterized protein.	Uncharacterized protein.	0.979