19 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	bach1-2	Uncharacterized protein. (715 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	ubc	Uncharacterized protein. (533 aa)
	Skp2.L	F-box domain-containing protein. (420 aa)
	fbxl17	F-box/LRR-repeat protein 17; Substrate-recognition component of the SCF(FBXL17) E3 ubiquitin ligase complex, a key component of a quality control pathway required to ensure functional dimerization of BTB domain-containing proteins (dimerization quality control, DQC). FBXL17 specifically recognizes and binds a conserved degron of non-consecutive residues present at the interface of BTB dimers of aberrant composition: aberrant BTB dimer are then ubiquitinated by the SCF(FBXL17) complex and degraded by the proteaseome (By similarity). The ability of the SCF(FBXL17) complex to eliminate co [...] (673 aa)
	MGC114992	MGC114992 protein; Belongs to the cullin family. (776 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	rps27a	MGC81889 protein. (156 aa)
	A0A1L8EQB4	BZIP domain-containing protein. (156 aa)
	A0A1L8EXT0	BZIP domain-containing protein. (156 aa)
	A0A1L8FRQ0	CULLIN_2 domain-containing protein; Belongs to the cullin family. (701 aa)
	bach2	Uncharacterized protein. (827 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	bach2-2	Uncharacterized protein. (830 aa)
	rbx1	RING-type domain-containing protein. (120 aa)
	Rbx1.L	RING-type domain-containing protein. (168 aa)
	skp1	Uncharacterized protein; Belongs to the SKP1 family. (163 aa)
	skp1-2	Uncharacterized protein; Belongs to the SKP1 family. (221 aa)
	bach1	BZIP domain-containing protein. (651 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EQB4	A0A1L8FRQ0	A0A1L8EQB4	A0A1L8FRQ0	BZIP domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.585
A0A1L8EQB4	MGC114992	A0A1L8EQB4	Q4V7X4	BZIP domain-containing protein.	MGC114992 protein; Belongs to the cullin family.	0.585
A0A1L8EQB4	Rbx1.L	A0A1L8EQB4	A0A1L8GNG7	BZIP domain-containing protein.	RING-type domain-containing protein.	0.549
A0A1L8EQB4	bach1	A0A1L8EQB4	A0A1L8H566	BZIP domain-containing protein.	BZIP domain-containing protein.	0.885
A0A1L8EQB4	bach1-2	A0A1L8EQB4	A0A1L8HCV7	BZIP domain-containing protein.	Uncharacterized protein.	0.885
A0A1L8EQB4	bach2	A0A1L8EQB4	A0A1L8G350	BZIP domain-containing protein.	Uncharacterized protein.	0.865
A0A1L8EQB4	bach2-2	A0A1L8EQB4	A0A1L8G9P7	BZIP domain-containing protein.	Uncharacterized protein.	0.865
A0A1L8EQB4	rbx1	A0A1L8EQB4	A0A1L8GGS6	BZIP domain-containing protein.	RING-type domain-containing protein.	0.549
A0A1L8EQB4	skp1	A0A1L8EQB4	A0A1L8GR29	BZIP domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.585
A0A1L8EQB4	skp1-2	A0A1L8EQB4	A0A1L8GWN2	BZIP domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.585
A0A1L8EXT0	A0A1L8FRQ0	A0A1L8EXT0	A0A1L8FRQ0	BZIP domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.585
A0A1L8EXT0	MGC114992	A0A1L8EXT0	Q4V7X4	BZIP domain-containing protein.	MGC114992 protein; Belongs to the cullin family.	0.585
A0A1L8EXT0	Rbx1.L	A0A1L8EXT0	A0A1L8GNG7	BZIP domain-containing protein.	RING-type domain-containing protein.	0.549
A0A1L8EXT0	bach1	A0A1L8EXT0	A0A1L8H566	BZIP domain-containing protein.	BZIP domain-containing protein.	0.885
A0A1L8EXT0	bach1-2	A0A1L8EXT0	A0A1L8HCV7	BZIP domain-containing protein.	Uncharacterized protein.	0.885
A0A1L8EXT0	bach2	A0A1L8EXT0	A0A1L8G350	BZIP domain-containing protein.	Uncharacterized protein.	0.865
A0A1L8EXT0	bach2-2	A0A1L8EXT0	A0A1L8G9P7	BZIP domain-containing protein.	Uncharacterized protein.	0.865
A0A1L8EXT0	rbx1	A0A1L8EXT0	A0A1L8GGS6	BZIP domain-containing protein.	RING-type domain-containing protein.	0.549
A0A1L8EXT0	skp1	A0A1L8EXT0	A0A1L8GR29	BZIP domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.585
A0A1L8EXT0	skp1-2	A0A1L8EXT0	A0A1L8GWN2	BZIP domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.585