50 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8EJW3	Uncharacterized protein. (77 aa)
	A0A1L8ELP1	Uncharacterized protein. (505 aa)
	vwc2l	VWFC domain-containing protein. (222 aa)
	A0A1L8EQV7	Uncharacterized protein. (1078 aa)
	lrrc45	Uncharacterized protein. (679 aa)
	vwc2l-2	VWFC domain-containing protein. (222 aa)
	A0A1L8EY64	Uncharacterized protein. (187 aa)
	mgc145260	Uncharacterized protein. (1079 aa)
	A0A1L8F1J6	NEMO domain-containing protein. (307 aa)
	A0A1L8F4S5	NACHT domain-containing protein. (883 aa)
	lrrc74a	Uncharacterized protein. (579 aa)
	A0A1L8FCB3	Uncharacterized protein. (541 aa)
	nlrx1	NACHT domain-containing protein. (953 aa)
	A0A1L8FP24	NACHT domain-containing protein. (941 aa)
	A0A1L8FPX6	B30.2/SPRY domain-containing protein. (289 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	A0A1L8FU98	ANK_REP_REGION domain-containing protein. (651 aa)
	A0A1L8FUD6	B30.2/SPRY domain-containing protein. (169 aa)
	vwc2	VWFC domain-containing protein. (324 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (490 aa)
	Lrrc14.L	Uncharacterized protein. (509 aa)
	A0A1L8G0I6	Uncharacterized protein. (1423 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8GA11	Uncharacterized protein. (574 aa)
	Lrrc34.L	Uncharacterized protein. (415 aa)
	Traf6.S	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
	n4bp1	RNase_Zc3h12a domain-containing protein. (861 aa)
	Traf6.L	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
	A0A1L8GKK8	NACHT domain-containing protein. (1832 aa)
	N4bp1.L	RNase_Zc3h12a domain-containing protein. (848 aa)
	Ikbip.S	Uncharacterized protein. (260 aa)
	Usp18.S	USP domain-containing protein. (321 aa)
	ikbkb	Uncharacterized protein. (769 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	kxd1	KxDL domain-containing protein. (195 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HS64	B30.2/SPRY domain-containing protein. (140 aa)
	A0A1L8HV52	Uncharacterized protein. (881 aa)
	Kxd1.L	KxDL domain-containing protein. (195 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	khnyn	RNase_Zc3h12a domain-containing protein. (841 aa)
	lrrc74b	Uncharacterized protein. (530 aa)
	A0A310TN53	Uncharacterized protein. (210 aa)
	A0A310TNK6	Uncharacterized protein. (708 aa)
	A0A310UC42	B30.2/SPRY domain-containing protein. (189 aa)
	khnyn-2	LOC100137686 protein. (827 aa)
	usp14-2	Ubiquitin carboxyl-terminal hydrolase. (489 aa)
	rps27a	MGC81889 protein. (156 aa)
	uba52	MGC80109 protein. (128 aa)
	ubc-2	Ubc-prov protein. (609 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F1J6	A0A1L8HCZ9	A0A1L8F1J6	A0A1L8HCZ9	NEMO domain-containing protein.	Uncharacterized protein.	0.549
A0A1L8F1J6	ikbkb	A0A1L8F1J6	A0A1L8H261	NEMO domain-containing protein.	Uncharacterized protein.	0.983
A0A1L8F1J6	ubc	A0A1L8F1J6	A0A1L8HQK4	NEMO domain-containing protein.	Uncharacterized protein.	0.549
A0A1L8F1J6	ubc-2	A0A1L8F1J6	Q7SY79	NEMO domain-containing protein.	Ubc-prov protein.	0.549
A0A1L8F4S5	A0A1L8G5V1	A0A1L8F4S5	A0A1L8G5V1	NACHT domain-containing protein.	Ubiquitin-like domain-containing protein.	0.477
A0A1L8F4S5	A0A1L8HCZ9	A0A1L8F4S5	A0A1L8HCZ9	NACHT domain-containing protein.	Uncharacterized protein.	0.451
A0A1L8F4S5	ikbkb	A0A1L8F4S5	A0A1L8H261	NACHT domain-containing protein.	Uncharacterized protein.	0.568
A0A1L8F4S5	rps27a	A0A1L8F4S5	Q6GMC1	NACHT domain-containing protein.	MGC81889 protein.	0.477
A0A1L8F4S5	ubc	A0A1L8F4S5	A0A1L8HQK4	NACHT domain-containing protein.	Uncharacterized protein.	0.451
A0A1L8F4S5	ubc-2	A0A1L8F4S5	Q7SY79	NACHT domain-containing protein.	Ubc-prov protein.	0.451
A0A1L8F4S5	usp14	A0A1L8F4S5	A0A1L8FYP5	NACHT domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.442
A0A1L8F4S5	usp14-2	A0A1L8F4S5	Q641D7	NACHT domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.442
A0A1L8FP24	A0A1L8G5V1	A0A1L8FP24	A0A1L8G5V1	NACHT domain-containing protein.	Ubiquitin-like domain-containing protein.	0.477
A0A1L8FP24	A0A1L8HCZ9	A0A1L8FP24	A0A1L8HCZ9	NACHT domain-containing protein.	Uncharacterized protein.	0.451
A0A1L8FP24	ikbkb	A0A1L8FP24	A0A1L8H261	NACHT domain-containing protein.	Uncharacterized protein.	0.568
A0A1L8FP24	rps27a	A0A1L8FP24	Q6GMC1	NACHT domain-containing protein.	MGC81889 protein.	0.477
A0A1L8FP24	ubc	A0A1L8FP24	A0A1L8HQK4	NACHT domain-containing protein.	Uncharacterized protein.	0.451
A0A1L8FP24	ubc-2	A0A1L8FP24	Q7SY79	NACHT domain-containing protein.	Ubc-prov protein.	0.451
A0A1L8FP24	usp14	A0A1L8FP24	A0A1L8FYP5	NACHT domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.442
A0A1L8FP24	usp14-2	A0A1L8FP24	Q641D7	NACHT domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.442