(3 nodes) Ribosomal protein L5 network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8G244	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (167 aa)
	A0A1L8HFU5	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (177 aa)
	rpl11	MGC85310 protein; Belongs to the universal ribosomal protein uL5 family. (177 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8G244	A0A1L8HFU5	A0A1L8G244	A0A1L8HFU5	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.900
A0A1L8G244	rpl11	A0A1L8G244	Q66KY6	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	MGC85310 protein; Belongs to the universal ribosomal protein uL5 family.	0.900
A0A1L8HFU5	A0A1L8G244	A0A1L8HFU5	A0A1L8G244	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.900
A0A1L8HFU5	rpl11	A0A1L8HFU5	Q66KY6	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	MGC85310 protein; Belongs to the universal ribosomal protein uL5 family.	0.900
rpl11	A0A1L8G244	Q66KY6	A0A1L8G244	MGC85310 protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.900
rpl11	A0A1L8HFU5	Q66KY6	A0A1L8HFU5	MGC85310 protein; Belongs to the universal ribosomal protein uL5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.900