(6 nodes) Ribosomal protein L3 network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8EQZ1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (407 aa)
	Rpl3l.L	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (407 aa)
	Mrpl3.S	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (342 aa)
	mrpl3	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (342 aa)
	A0A1L8GGZ9	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (403 aa)
	rpl3	Rpl3-prov protein; Belongs to the universal ribosomal protein uL3 family. (403 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EQZ1	A0A1L8GGZ9	A0A1L8EQZ1	A0A1L8GGZ9	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.510
A0A1L8EQZ1	rpl3	A0A1L8EQZ1	Q7ZYR1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Rpl3-prov protein; Belongs to the universal ribosomal protein uL3 family.	0.510
A0A1L8GGZ9	A0A1L8EQZ1	A0A1L8GGZ9	A0A1L8EQZ1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.510
A0A1L8GGZ9	Rpl3l.L	A0A1L8GGZ9	A0A1L8EYM2	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.510
Mrpl3.S	mrpl3	A0A1L8FRL2	A0A1L8FWJ9	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.900
Rpl3l.L	A0A1L8GGZ9	A0A1L8EYM2	A0A1L8GGZ9	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.510
Rpl3l.L	rpl3	A0A1L8EYM2	Q7ZYR1	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Rpl3-prov protein; Belongs to the universal ribosomal protein uL3 family.	0.517
mrpl3	Mrpl3.S	A0A1L8FWJ9	A0A1L8FRL2	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.900
rpl3	A0A1L8EQZ1	Q7ZYR1	A0A1L8EQZ1	Rpl3-prov protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.510
rpl3	Rpl3l.L	Q7ZYR1	A0A1L8EYM2	Rpl3-prov protein; Belongs to the universal ribosomal protein uL3 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.517