(14 nodes) MreB/Mbl protein network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Hspa4.S	Uncharacterized protein. (836 aa)
	hspa5	Uncharacterized protein; Belongs to the heat shock protein 70 family. (658 aa)
	hspa9	MGC52616 protein; Belongs to the heat shock protein 70 family. (670 aa)
	hspa1l	Hsc70 protein; Belongs to the heat shock protein 70 family. (650 aa)
	hspa5-2	Hspa5 protein; Belongs to the heat shock protein 70 family. (655 aa)
	Hspa2.L	Uncharacterized protein; Belongs to the heat shock protein 70 family. (634 aa)
	hspa14	Uncharacterized protein; Belongs to the heat shock protein 70 family. (509 aa)
	A0A1L8HIX9	Uncharacterized protein. (814 aa)
	hspa13	Uncharacterized protein. (478 aa)
	Hsph1.S	Uncharacterized protein. (855 aa)
	Hspa8.L	Uncharacterized protein; Belongs to the heat shock protein 70 family. (646 aa)
	Hspa14.S	Uncharacterized protein; Belongs to the heat shock protein 70 family. (507 aa)
	hspa4	Uncharacterized protein. (837 aa)
	Hspa9.L	Uncharacterized protein; Belongs to the heat shock protein 70 family. (665 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8HIX9	Hspa14.S	A0A1L8HIX9	A0A1L8GTT8	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.655
A0A1L8HIX9	Hspa2.L	A0A1L8HIX9	A0A1L8FA78	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.734
A0A1L8HIX9	Hspa4.S	A0A1L8HIX9	A0A1L8GV91	Uncharacterized protein.	Uncharacterized protein.	0.643
A0A1L8HIX9	Hspa8.L	A0A1L8HIX9	A0A1L8FKY3	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.737
A0A1L8HIX9	Hspa9.L	A0A1L8HIX9	A0A1L8GWU8	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.835
A0A1L8HIX9	hspa13	A0A1L8HIX9	A0A1L8HCX2	Uncharacterized protein.	Uncharacterized protein.	0.690
A0A1L8HIX9	hspa14	A0A1L8HIX9	A0A1L8GZD6	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.657
A0A1L8HIX9	hspa1l	A0A1L8HIX9	Q8AVE2	Uncharacterized protein.	Hsc70 protein; Belongs to the heat shock protein 70 family.	0.735
A0A1L8HIX9	hspa4	A0A1L8HIX9	A0A1L8GXI4	Uncharacterized protein.	Uncharacterized protein.	0.643
A0A1L8HIX9	hspa5	A0A1L8HIX9	A0A1L8F6I3	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.784
A0A1L8HIX9	hspa5-2	A0A1L8HIX9	Q8AVE3	Uncharacterized protein.	Hspa5 protein; Belongs to the heat shock protein 70 family.	0.784
A0A1L8HIX9	hspa9	A0A1L8HIX9	Q7ZX34	Uncharacterized protein.	MGC52616 protein; Belongs to the heat shock protein 70 family.	0.835
Hspa14.S	A0A1L8HIX9	A0A1L8GTT8	A0A1L8HIX9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.655
Hspa14.S	Hspa2.L	A0A1L8GTT8	A0A1L8FA78	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.419
Hspa14.S	Hspa4.S	A0A1L8GTT8	A0A1L8GV91	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.763
Hspa14.S	Hspa8.L	A0A1L8GTT8	A0A1L8FKY3	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.424
Hspa14.S	Hspa9.L	A0A1L8GTT8	A0A1L8GWU8	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.720
Hspa14.S	Hsph1.S	A0A1L8GTT8	A0A1L8HAI7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.735
Hspa14.S	hspa13	A0A1L8GTT8	A0A1L8HCX2	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.719
Hspa14.S	hspa1l	A0A1L8GTT8	Q8AVE2	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Hsc70 protein; Belongs to the heat shock protein 70 family.	0.422