8 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	abl1	Tyrosine-protein kinase. (1122 aa)
	Cdk20.S	Protein kinase domain-containing protein. (376 aa)
	rbl2	Uncharacterized protein. (1087 aa)
	crk	Uncharacterized protein. (297 aa)
	Crk.L	Uncharacterized protein. (297 aa)
	pxn	Uncharacterized protein; Belongs to the paxillin family. (542 aa)
	src	Tyrosine-protein kinase. (532 aa)
	pxn-2	LOC397826 protein; Belongs to the paxillin family. (539 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Crk.L	abl1	A0A1L8HDP2	A0A1L8F1E7	Uncharacterized protein.	Tyrosine-protein kinase.	0.986
Crk.L	pxn	A0A1L8HDP2	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.996
Crk.L	pxn-2	A0A1L8HDP2	Q9I957	Uncharacterized protein.	LOC397826 protein; Belongs to the paxillin family.	0.996
Crk.L	src	A0A1L8HDP2	Q2TAR1	Uncharacterized protein.	Tyrosine-protein kinase.	0.887
abl1	Crk.L	A0A1L8F1E7	A0A1L8HDP2	Tyrosine-protein kinase.	Uncharacterized protein.	0.986
abl1	crk	A0A1L8F1E7	A0A1L8H629	Tyrosine-protein kinase.	Uncharacterized protein.	0.986
abl1	pxn	A0A1L8F1E7	A0A1L8I058	Tyrosine-protein kinase.	Uncharacterized protein; Belongs to the paxillin family.	0.456
abl1	pxn-2	A0A1L8F1E7	Q9I957	Tyrosine-protein kinase.	LOC397826 protein; Belongs to the paxillin family.	0.456
crk	abl1	A0A1L8H629	A0A1L8F1E7	Uncharacterized protein.	Tyrosine-protein kinase.	0.986
crk	pxn	A0A1L8H629	A0A1L8I058	Uncharacterized protein.	Uncharacterized protein; Belongs to the paxillin family.	0.996
crk	pxn-2	A0A1L8H629	Q9I957	Uncharacterized protein.	LOC397826 protein; Belongs to the paxillin family.	0.996
crk	src	A0A1L8H629	Q2TAR1	Uncharacterized protein.	Tyrosine-protein kinase.	0.887
pxn	Crk.L	A0A1L8I058	A0A1L8HDP2	Uncharacterized protein; Belongs to the paxillin family.	Uncharacterized protein.	0.996
pxn	abl1	A0A1L8I058	A0A1L8F1E7	Uncharacterized protein; Belongs to the paxillin family.	Tyrosine-protein kinase.	0.456
pxn	crk	A0A1L8I058	A0A1L8H629	Uncharacterized protein; Belongs to the paxillin family.	Uncharacterized protein.	0.996
pxn	pxn-2	A0A1L8I058	Q9I957	Uncharacterized protein; Belongs to the paxillin family.	LOC397826 protein; Belongs to the paxillin family.	0.900
pxn	src	A0A1L8I058	Q2TAR1	Uncharacterized protein; Belongs to the paxillin family.	Tyrosine-protein kinase.	0.960
pxn-2	Crk.L	Q9I957	A0A1L8HDP2	LOC397826 protein; Belongs to the paxillin family.	Uncharacterized protein.	0.996
pxn-2	abl1	Q9I957	A0A1L8F1E7	LOC397826 protein; Belongs to the paxillin family.	Tyrosine-protein kinase.	0.456
pxn-2	crk	Q9I957	A0A1L8H629	LOC397826 protein; Belongs to the paxillin family.	Uncharacterized protein.	0.996