12 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8EYQ3	LLGL domain-containing protein. (1049 aa)
	glb1	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family. (642 aa)
	Egf.L	Uncharacterized protein. (1031 aa)
	Tjp1.S	Uncharacterized protein; Belongs to the MAGUK family. (1705 aa)
	patj	Uncharacterized protein. (1796 aa)
	Prkci.L	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
	Glb1l.L	Beta-galactosidase. (645 aa)
	pard3-2	Uncharacterized protein. (1332 aa)
	glb1l2	Beta-galactosidase. (634 aa)
	Glb1l2.S	Beta-galactosidase. (616 aa)
	Lgals4.L	Galectin. (319 aa)
	lgals4.2	Galectin. (319 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EYQ3	Prkci.L	A0A1L8EYQ3	A0A1L8GAK2	LLGL domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.992
A0A1L8EYQ3	patj	A0A1L8EYQ3	A0A1L8GLZ0	LLGL domain-containing protein.	Uncharacterized protein.	0.794
Egf.L	Tjp1.S	A0A1L8HUT3	A0A1L8H090	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.433
Glb1l.L	glb1	A0A1L8FWQ8	A0A1L8EVM8	Beta-galactosidase.	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	0.902
Lgals4.L	patj	A0A1L8F924	A0A1L8GLZ0	Galectin.	Uncharacterized protein.	0.443
Prkci.L	A0A1L8EYQ3	A0A1L8GAK2	A0A1L8EYQ3	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	LLGL domain-containing protein.	0.992
Prkci.L	Tjp1.S	A0A1L8GAK2	A0A1L8H090	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein; Belongs to the MAGUK family.	0.841
Prkci.L	pard3-2	A0A1L8GAK2	A0A1L8FVE8	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.997
Prkci.L	patj	A0A1L8GAK2	A0A1L8GLZ0	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.927
Tjp1.S	Egf.L	A0A1L8H090	A0A1L8HUT3	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.433
Tjp1.S	Prkci.L	A0A1L8H090	A0A1L8GAK2	Uncharacterized protein; Belongs to the MAGUK family.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.841
Tjp1.S	pard3-2	A0A1L8H090	A0A1L8FVE8	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.683
Tjp1.S	patj	A0A1L8H090	A0A1L8GLZ0	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.446
glb1	Glb1l.L	A0A1L8EVM8	A0A1L8FWQ8	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	Beta-galactosidase.	0.902
lgals4.2	patj	A0A1L8F404	A0A1L8GLZ0	Galectin.	Uncharacterized protein.	0.443
pard3-2	Prkci.L	A0A1L8FVE8	A0A1L8GAK2	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.997
pard3-2	Tjp1.S	A0A1L8FVE8	A0A1L8H090	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.683
pard3-2	patj	A0A1L8FVE8	A0A1L8GLZ0	Uncharacterized protein.	Uncharacterized protein.	0.935
patj	A0A1L8EYQ3	A0A1L8GLZ0	A0A1L8EYQ3	Uncharacterized protein.	LLGL domain-containing protein.	0.794
patj	Lgals4.L	A0A1L8GLZ0	A0A1L8F924	Uncharacterized protein.	Galectin.	0.443