8 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mcm5	DNA helicase; Belongs to the MCM family. (735 aa)
	Mrc1.L	C-type lectin domain-containing protein. (220 aa)
	rad9a	Cell cycle checkpoint control protein; Belongs to the rad9 family. (377 aa)
	Clspn.S	Claspin. (1286 aa)
	crb2	Uncharacterized protein. (1472 aa)
	chek1-2	Protein kinase domain-containing protein. (510 aa)
	topbp1	Uncharacterized protein. (1573 aa)
	mcm5-2	DNA helicase; Belongs to the MCM family. (735 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Clspn.S	Mrc1.L	F8WKR8	A0A1L8H4B7	Claspin.	C-type lectin domain-containing protein.	0.934
Clspn.S	chek1-2	F8WKR8	A0A1L8FL95	Claspin.	Protein kinase domain-containing protein.	0.999
Clspn.S	crb2	F8WKR8	A0A1L8F1Z8	Claspin.	Uncharacterized protein.	0.420
Clspn.S	mcm5	F8WKR8	A0A1L8GGS4	Claspin.	DNA helicase; Belongs to the MCM family.	0.905
Clspn.S	mcm5-2	F8WKR8	A0A1L8GNF3	Claspin.	DNA helicase; Belongs to the MCM family.	0.905
Clspn.S	rad9a	F8WKR8	Q7ZZU5	Claspin.	Cell cycle checkpoint control protein; Belongs to the rad9 family.	0.978
Clspn.S	topbp1	F8WKR8	A0A1L8FWJ6	Claspin.	Uncharacterized protein.	0.993
Mrc1.L	Clspn.S	A0A1L8H4B7	F8WKR8	C-type lectin domain-containing protein.	Claspin.	0.934
Mrc1.L	chek1-2	A0A1L8H4B7	A0A1L8FL95	C-type lectin domain-containing protein.	Protein kinase domain-containing protein.	0.741
Mrc1.L	crb2	A0A1L8H4B7	A0A1L8F1Z8	C-type lectin domain-containing protein.	Uncharacterized protein.	0.433
Mrc1.L	rad9a	A0A1L8H4B7	Q7ZZU5	C-type lectin domain-containing protein.	Cell cycle checkpoint control protein; Belongs to the rad9 family.	0.740
Mrc1.L	topbp1	A0A1L8H4B7	A0A1L8FWJ6	C-type lectin domain-containing protein.	Uncharacterized protein.	0.552
chek1-2	Clspn.S	A0A1L8FL95	F8WKR8	Protein kinase domain-containing protein.	Claspin.	0.999
chek1-2	Mrc1.L	A0A1L8FL95	A0A1L8H4B7	Protein kinase domain-containing protein.	C-type lectin domain-containing protein.	0.741
chek1-2	crb2	A0A1L8FL95	A0A1L8F1Z8	Protein kinase domain-containing protein.	Uncharacterized protein.	0.723
chek1-2	mcm5	A0A1L8FL95	A0A1L8GGS4	Protein kinase domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.868
chek1-2	mcm5-2	A0A1L8FL95	A0A1L8GNF3	Protein kinase domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.868
chek1-2	rad9a	A0A1L8FL95	Q7ZZU5	Protein kinase domain-containing protein.	Cell cycle checkpoint control protein; Belongs to the rad9 family.	0.983
chek1-2	topbp1	A0A1L8FL95	A0A1L8FWJ6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.992
crb2	Clspn.S	A0A1L8F1Z8	F8WKR8	Uncharacterized protein.	Claspin.	0.420