STRINGSTRING
mbd1 mbd1 A0A1L8EY07 A0A1L8EY07 Sumo1.L Sumo1.L sumo2-2 sumo2-2 Sumo1.S Sumo1.S h3f3b h3f3b sumo2 sumo2 mecp2 mecp2 creb1 creb1 rplp0-2 rplp0-2 hdac1-2 hdac1-2 myc myc pias3 pias3 A0A310TTQ1 A0A310TTQ1 Kdm2b.L Kdm2b.L Kdm2b.S Kdm2b.S Uhrf1.S Uhrf1.S baz2a baz2a hdac1 hdac1 Ncor1.L Ncor1.L Pias1.L Pias1.L Dnmt1.L Dnmt1.L sin3a sin3a Hdac3.S Hdac3.S pias1 pias1 zbtb38-2 zbtb38-2 zbtb38 zbtb38 hist2h3c hist2h3c Vim.L Vim.L Myc.S Myc.S ski-2 ski-2 Setdb1.L Setdb1.L atrx atrx mbd1-2 mbd1-2 Suv39h1.L Suv39h1.L setdb1 setdb1 suv39h1 suv39h1 Zbtb33.S Zbtb33.S
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mbd1Uncharacterized protein. (638 aa)
A0A1L8EY07Histone H3; Belongs to the histone H3 family. (120 aa)
Sumo1.LUbiquitin-like domain-containing protein. (148 aa)
sumo2-2Ubiquitin-like domain-containing protein. (98 aa)
Sumo1.SUbiquitin-like domain-containing protein. (141 aa)
h3f3bHistone H3; Belongs to the histone H3 family. (136 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
mecp2Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (467 aa)
creb1Creb1-prov protein. (324 aa)
rplp0-260S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
hdac1-2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (480 aa)
mycTranscriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (420 aa)
pias3MGC81944 protein. (633 aa)
A0A310TTQ1Histone H3; Belongs to the histone H3 family. (136 aa)
Kdm2b.LUncharacterized protein. (1214 aa)
Kdm2b.SUncharacterized protein. (885 aa)
Uhrf1.SUncharacterized protein. (397 aa)
baz2aUncharacterized protein. (1698 aa)
hdac1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (480 aa)
Ncor1.LUncharacterized protein. (2518 aa)
Pias1.LUncharacterized protein. (649 aa)
Dnmt1.LDNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1488 aa)
sin3aHDAC_interact domain-containing protein. (1273 aa)
Hdac3.SHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (405 aa)
pias1Uncharacterized protein. (640 aa)
zbtb38-2Uncharacterized protein. (1247 aa)
zbtb38Uncharacterized protein. (1245 aa)
hist2h3cHistone H3; Belongs to the histone H3 family. (136 aa)
Vim.LIF rod domain-containing protein; Belongs to the intermediate filament family. (458 aa)
Myc.SMyc_N domain-containing protein. (176 aa)
ski-2c-SKI_SMAD_bind domain-containing protein. (717 aa)
Setdb1.LUncharacterized protein. (1343 aa)
atrxUncharacterized protein. (2276 aa)
mbd1-2Uncharacterized protein. (625 aa)
Suv39h1.LHistone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (432 aa)
setdb1Uncharacterized protein. (1290 aa)
suv39h1Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (421 aa)
Zbtb33.SUncharacterized protein. (801 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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