STRINGSTRING
cul3 cul3 cul3-2 cul3-2 Ccne1.S Ccne1.S ccne1 ccne1 Rho.L Rho.L gabpa gabpa Cdk2.S Cdk2.S gabpa-2 gabpa-2 rhoa rhoa actl6a actl6a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cul3CULLIN_2 domain-containing protein; Belongs to the cullin family. (768 aa)
cul3-2CULLIN_2 domain-containing protein; Belongs to the cullin family. (768 aa)
Ccne1.SCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (408 aa)
ccne1Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (408 aa)
Rho.LRhodopsin. (459 aa)
gabpaUncharacterized protein. (454 aa)
Cdk2.SProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (297 aa)
gabpa-2Gabpa-prov protein. (452 aa)
rhoaMGC64296 protein. (193 aa)
actl6aBaf53a-pending-prov protein; Belongs to the actin family. (429 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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