STRINGSTRING
Egf.L Egf.L pxn pxn src src ccnd1 ccnd1 pxn-2 pxn-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Egf.LUncharacterized protein. (1031 aa)
pxnUncharacterized protein; Belongs to the paxillin family. (542 aa)
srcTyrosine-protein kinase. (532 aa)
ccnd1Ccnd1-prov protein; Belongs to the cyclin family. (291 aa)
pxn-2LOC397826 protein; Belongs to the paxillin family. (539 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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