13 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pfn2	Profilin; Belongs to the profilin family. (140 aa)
	rhoa	MGC64296 protein. (193 aa)
	pfn1	Profilin; Belongs to the profilin family. (138 aa)
	cdh3	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (905 aa)
	cdh1	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (871 aa)
	Cdh3.S	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (880 aa)
	Prkci.L	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
	Pfn4.S	Profilin; Belongs to the profilin family. (172 aa)
	A0A1L8G4B9	Profilin; Belongs to the profilin family. (126 aa)
	prkcz	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (590 aa)
	fmn1	FH2 domain-containing protein. (1393 aa)
	Axin1.S	Uncharacterized protein. (839 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8G4B9	actl6a	A0A1L8G4B9	Q7ZYI5	Profilin; Belongs to the profilin family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.987
A0A1L8G4B9	fmn1	A0A1L8G4B9	A0A1L8FAR9	Profilin; Belongs to the profilin family.	FH2 domain-containing protein.	0.976
A0A1L8G4B9	rhoa	A0A1L8G4B9	Q7SZA9	Profilin; Belongs to the profilin family.	MGC64296 protein.	0.749
Axin1.S	Cdh3.S	A0A1L8ER48	A0A1L8GET9	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.796
Axin1.S	actl6a	A0A1L8ER48	Q7ZYI5	Uncharacterized protein.	Baf53a-pending-prov protein; Belongs to the actin family.	0.715
Axin1.S	cdh1	A0A1L8ER48	A0A1L8GKV4	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.795
Axin1.S	cdh3	A0A1L8ER48	A0A1L8GKW6	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.801
Axin1.S	rhoa	A0A1L8ER48	Q7SZA9	Uncharacterized protein.	MGC64296 protein.	0.551
Cdh3.S	Axin1.S	A0A1L8GET9	A0A1L8ER48	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.796
Cdh3.S	Prkci.L	A0A1L8GET9	A0A1L8GAK2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.694
Cdh3.S	actl6a	A0A1L8GET9	Q7ZYI5	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Baf53a-pending-prov protein; Belongs to the actin family.	0.931
Cdh3.S	cdh1	A0A1L8GET9	A0A1L8GKV4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.903
Cdh3.S	cdh3	A0A1L8GET9	A0A1L8GKW6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.901
Cdh3.S	fmn1	A0A1L8GET9	A0A1L8FAR9	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	FH2 domain-containing protein.	0.559
Cdh3.S	prkcz	A0A1L8GET9	A0A1L8FM28	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.406
Cdh3.S	rhoa	A0A1L8GET9	Q7SZA9	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	MGC64296 protein.	0.810
Pfn4.S	actl6a	A0A1L8G5E9	Q7ZYI5	Profilin; Belongs to the profilin family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.987
Pfn4.S	fmn1	A0A1L8G5E9	A0A1L8FAR9	Profilin; Belongs to the profilin family.	FH2 domain-containing protein.	0.984
Pfn4.S	pfn1	A0A1L8G5E9	Q3KQ82	Profilin; Belongs to the profilin family.	Profilin; Belongs to the profilin family.	0.914
Pfn4.S	pfn2	A0A1L8G5E9	Q7ZWT1	Profilin; Belongs to the profilin family.	Profilin; Belongs to the profilin family.	0.910