STRINGSTRING
dlx5 dlx5 mecp2 mecp2 dusp6 dusp6 gapdh gapdh stmn3-2 stmn3-2 actl6a actl6a Gapdh.S Gapdh.S efnb2 efnb2 stmn2-2 stmn2-2 bdnf-2 bdnf-2 stmn3 stmn3 efnb1 efnb1 Ntrk2.S Ntrk2.S ntrk2 ntrk2 stmn1 stmn1 Efnb2.S Efnb2.S Stmn1.S Stmn1.S Efnb3.L Efnb3.L Tm7 Tm7 bdnf bdnf arc arc stmn2 stmn2 Dlx5.L Dlx5.L Gad2.L Gad2.L
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dlx5Homeobox domain-containing protein. (297 aa)
mecp2Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (467 aa)
dusp6Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (378 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
stmn3-2Stathmin; Belongs to the stathmin family. (180 aa)
actl6aBaf53a-pending-prov protein; Belongs to the actin family. (429 aa)
Gapdh.SGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
efnb2Efnb2a protein; Belongs to the ephrin family. (329 aa)
stmn2-2Stathmin; Belongs to the stathmin family. (178 aa)
bdnf-2Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (247 aa)
stmn3Stathmin; Belongs to the stathmin family. (180 aa)
efnb1Ephrin-B1 (EPH family ligand); Belongs to the ephrin family. (329 aa)
Ntrk2.STyrosine-protein kinase receptor. (821 aa)
ntrk2Tyrosine-protein kinase receptor. (807 aa)
stmn1Stathmin; Belongs to the stathmin family. (145 aa)
Efnb2.SEphrin RBD domain-containing protein; Belongs to the ephrin family. (329 aa)
Stmn1.SUncharacterized protein. (242 aa)
Efnb3.LUncharacterized protein. (186 aa)
Tm7Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
bdnfBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (247 aa)
arcArc_C domain-containing protein. (383 aa)
stmn2Stathmin; Belongs to the stathmin family. (178 aa)
Dlx5.LHomeobox domain-containing protein. (298 aa)
Gad2.LUncharacterized protein. (588 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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