STRINGSTRING
pxdn-2 pxdn-2 myc myc actl6a actl6a pard6b pard6b pard6b-2 pard6b-2 dvl1 dvl1 tbxt tbxt pxdn pxdn Prkci.L Prkci.L tbxt-2 tbxt-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pxdn-2Uncharacterized protein. (1464 aa)
mycTranscriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (420 aa)
actl6aBaf53a-pending-prov protein; Belongs to the actin family. (429 aa)
pard6bUncharacterized protein. (377 aa)
pard6b-2Uncharacterized protein. (376 aa)
dvl1Uncharacterized protein. (606 aa)
tbxtUncharacterized protein. (432 aa)
pxdnUncharacterized protein. (1461 aa)
Prkci.LProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
tbxt-2MGC81453 protein. (432 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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