STRINGSTRING
Zic1.S Zic1.S cdknx cdknx gapdh gapdh fgf8 fgf8 stmn3-2 stmn3-2 ccnd1 ccnd1 Gapdh.S Gapdh.S neurod1-2 neurod1-2 stmn2-2 stmn2-2 stmn3 stmn3 zic5-2 zic5-2 A0A310TTQ1 A0A310TTQ1 Hes4.L Hes4.L Wnt1.L Wnt1.L stmn1 stmn1 wnt1 wnt1 Stmn1.S Stmn1.S rpl8 rpl8 Tp53.L Tp53.L mdm2 mdm2 Irx3.L Irx3.L irx3 irx3 nr2e1 nr2e1 stmn4 stmn4 mmut mmut h3f3b h3f3b neurod1 neurod1 A0A1L8EY07 A0A1L8EY07 foxg1 foxg1 Dicer1.S Dicer1.S Notch1.S Notch1.S sox3 sox3 notch1 notch1 dicer1 dicer1 hes3 hes3 hes4 hes4 hes3-2 hes3-2 tubb2b tubb2b Shh.L Shh.L stmn2 stmn2 hist2h3c hist2h3c Nr2e1.S Nr2e1.S hes1 hes1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Zic1.SUncharacterized protein. (443 aa)
cdknxCyclin-dependent kinase inhibitor p28. (209 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
fgf8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (211 aa)
stmn3-2Stathmin; Belongs to the stathmin family. (180 aa)
ccnd1Ccnd1-prov protein; Belongs to the cyclin family. (291 aa)
Gapdh.SGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
neurod1-2Neurogenic differentiation factor. (357 aa)
stmn2-2Stathmin; Belongs to the stathmin family. (178 aa)
stmn3Stathmin; Belongs to the stathmin family. (180 aa)
zic5-2Zic family member 5. (515 aa)
A0A310TTQ1Histone H3; Belongs to the histone H3 family. (136 aa)
Hes4.LOrange domain-containing protein. (171 aa)
Wnt1.LProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (372 aa)
stmn1Stathmin; Belongs to the stathmin family. (145 aa)
wnt1Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (372 aa)
Stmn1.SUncharacterized protein. (242 aa)
rpl8Ribosomal_L2_C domain-containing protein. (257 aa)
Tp53.LP53 domain-containing protein. (137 aa)
mdm2E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. (489 aa)
Irx3.LHomeobox domain-containing protein. (448 aa)
irx3Homeobox domain-containing protein. (445 aa)
nr2e1Uncharacterized protein. (386 aa)
stmn4Stathmin; Belongs to the stathmin family. (185 aa)
mmutB12-binding domain-containing protein. (758 aa)
h3f3bHistone H3; Belongs to the histone H3 family. (136 aa)
neurod1Neurogenic differentiation factor. (352 aa)
A0A1L8EY07Histone H3; Belongs to the histone H3 family. (120 aa)
foxg1Fork-head domain-containing protein. (418 aa)
Dicer1.SUncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1768 aa)
Notch1.SUncharacterized protein. (2524 aa)
sox3HMG box domain-containing protein. (309 aa)
notch1Uncharacterized protein. (2521 aa)
dicer1Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1891 aa)
hes3BHLH domain-containing protein. (204 aa)
hes4Uncharacterized protein. (277 aa)
hes3-2Uncharacterized protein. (204 aa)
tubb2bTubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (443 aa)
Shh.LHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (444 aa)
stmn2Stathmin; Belongs to the stathmin family. (178 aa)
hist2h3cHistone H3; Belongs to the histone H3 family. (136 aa)
Nr2e1.SUncharacterized protein. (386 aa)
hes1Uncharacterized protein. (267 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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