62 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Pdzrn3.L	RING-type domain-containing protein. (392 aa)
	A0A1L8GCY5	Uncharacterized protein. (1111 aa)
	fyn	Tyrosine-protein kinase. (537 aa)
	nid1-2	Uncharacterized protein. (1228 aa)
	A0A1L8G6G8	LAM_G_DOMAIN domain-containing protein. (319 aa)
	A0A1L8G5Z2	Uncharacterized protein. (677 aa)
	calm1	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	nid1	Uncharacterized protein. (1228 aa)
	A0A1L8G1E4	LAM_G_DOMAIN domain-containing protein. (219 aa)
	egfr-2	Receptor protein-tyrosine kinase. (1210 aa)
	egfr	Receptor protein-tyrosine kinase. (1208 aa)
	mnx1	Homeobox domain-containing protein. (339 aa)
	Hspg2.L	Uncharacterized protein. (4484 aa)
	A0A1L8FLY9	Uncharacterized protein. (1971 aa)
	fgfr2-2	Fibroblast growth factor receptor. (832 aa)
	A0A1L8FG40	Uncharacterized protein. (2091 aa)
	fgfr2	Fibroblast growth factor receptor. (830 aa)
	Nid2.L	Uncharacterized protein. (1530 aa)
	A0A1L8F9I2	Uncharacterized protein. (1651 aa)
	Cacna1b.S	Voltage-dependent N-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1B gives rise to N-type calcium currents. (1883 aa)
	abl1	Tyrosine-protein kinase. (1122 aa)
	A0A1L8F0M2	Uncharacterized protein. (1132 aa)
	nid2	Uncharacterized protein. (1531 aa)
	Dnaja3.L	Uncharacterized protein. (457 aa)
	grb2-2	Uncharacterized protein. (229 aa)
	erbb2	Receptor protein-tyrosine kinase. (1299 aa)
	Pofut1.L	Uncharacterized protein. (380 aa)
	dnaja3	Uncharacterized protein. (468 aa)
	crkl	MGC84382 protein. (302 aa)
	ptpn11b	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
	crkl-2	MGC81407 protein. (302 aa)
	myog	Myogenin U1. (235 aa)
	Ptpn11.S	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (595 aa)
	ache	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (600 aa)
	pxn-2	LOC397826 protein; Belongs to the paxillin family. (539 aa)
	grb2	Uncharacterized protein. (229 aa)
	hdac4	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1066 aa)
	fyn-2	Tyrosine-protein kinase. (537 aa)
	src	Tyrosine-protein kinase. (532 aa)
	mnx1-2	Hlxb9 protein. (333 aa)
	cib2	MGC81921 protein. (187 aa)
	Tln2.S	Uncharacterized protein. (2612 aa)
	A0A1L8I385	Uncharacterized protein. (2303 aa)
	fst-2	Uncharacterized protein. (341 aa)
	Nos1.L	Nitric oxide synthase; Produces nitric oxide (NO). (1419 aa)
	pxn	Uncharacterized protein; Belongs to the paxillin family. (542 aa)
	fst	Uncharacterized protein. (339 aa)
	Nos1.S	Nitric oxide synthase; Produces nitric oxide (NO). (1391 aa)
	Musk.S	Uncharacterized protein. (942 aa)
	erbb3-2	Protein kinase domain-containing protein. (1347 aa)
	Itga7.L	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1092 aa)
	Crk.L	Uncharacterized protein. (297 aa)
	erbb3	Protein kinase domain-containing protein. (1331 aa)
	Itga7.S	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1110 aa)
	Myog.S	BHLH domain-containing protein. (236 aa)
	crk	Uncharacterized protein. (297 aa)
	calml4-2	Uncharacterized protein. (152 aa)
	A0A1L8H034	Uncharacterized protein. (2543 aa)
	A0A1L8GTE5	Uncharacterized protein. (2543 aa)
	calml4	Uncharacterized protein. (153 aa)
	pdzrn3	Uncharacterized protein. (1058 aa)
	A0A1L8GK61	Uncharacterized protein. (1115 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F0M2	ache	A0A1L8F0M2	B1WBB9	Uncharacterized protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.541
A0A1L8F9I2	ache	A0A1L8F9I2	B1WBB9	Uncharacterized protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.541
A0A1L8FG40	A0A1L8FLY9	A0A1L8FG40	A0A1L8FLY9	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8FG40	A0A1L8G6G8	A0A1L8FG40	A0A1L8G6G8	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.551
A0A1L8FG40	Dnaja3.L	A0A1L8FG40	A0A1L8EYG0	Uncharacterized protein.	Uncharacterized protein.	0.552
A0A1L8FG40	Hspg2.L	A0A1L8FG40	A0A1L8FP59	Uncharacterized protein.	Uncharacterized protein.	0.929
A0A1L8FG40	Itga7.L	A0A1L8FG40	A0A1L8HHU1	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.456
A0A1L8FG40	Itga7.S	A0A1L8FG40	A0A1L8H9L0	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.456
A0A1L8FG40	Musk.S	A0A1L8FG40	A0A1L8HNT6	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A1L8FG40	Nid2.L	A0A1L8FG40	A0A1L8FA09	Uncharacterized protein.	Uncharacterized protein.	0.645
A0A1L8FG40	ache	A0A1L8FG40	B1WBB9	Uncharacterized protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.697
A0A1L8FG40	dnaja3	A0A1L8FG40	A0A1L8EQQ6	Uncharacterized protein.	Uncharacterized protein.	0.552
A0A1L8FG40	nid1	A0A1L8FG40	A0A1L8G2K1	Uncharacterized protein.	Uncharacterized protein.	0.845
A0A1L8FG40	nid1-2	A0A1L8FG40	A0A1L8G884	Uncharacterized protein.	Uncharacterized protein.	0.845
A0A1L8FG40	nid2	A0A1L8FG40	A0A1L8F057	Uncharacterized protein.	Uncharacterized protein.	0.675
A0A1L8FLY9	A0A1L8FG40	A0A1L8FLY9	A0A1L8FG40	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8FLY9	A0A1L8G6G8	A0A1L8FLY9	A0A1L8G6G8	Uncharacterized protein.	LAM_G_DOMAIN domain-containing protein.	0.551
A0A1L8FLY9	Dnaja3.L	A0A1L8FLY9	A0A1L8EYG0	Uncharacterized protein.	Uncharacterized protein.	0.552
A0A1L8FLY9	Hspg2.L	A0A1L8FLY9	A0A1L8FP59	Uncharacterized protein.	Uncharacterized protein.	0.929
A0A1L8FLY9	Itga7.L	A0A1L8FLY9	A0A1L8HHU1	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.456