12 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Fanca.L	Fanconi_A_N domain-containing protein. (1423 aa)
	ube2d1	Ube2d2-prov protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	Ube2v1.L	UBIQUITIN_CONJUGAT_2 domain-containing protein. (201 aa)
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	Fancm.L	Uncharacterized protein. (2165 aa)
	Rwdd2a.L	RWD domain-containing protein. (290 aa)
	fancd2	Uncharacterized protein. (1445 aa)
	fanci	Uncharacterized protein. (1337 aa)
	ube2t	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (192 aa)
	rwdd1-2	MGC84211 protein. (240 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fanca.L	Fancm.L	A0A310UBA7	A0A1L8F9Q1	Fanconi_A_N domain-containing protein.	Uncharacterized protein.	0.999
Fanca.L	fancd2	A0A310UBA7	A0A1L8GP71	Fanconi_A_N domain-containing protein.	Uncharacterized protein.	0.999
Fanca.L	fanci	A0A310UBA7	A0A1L8H0X8	Fanconi_A_N domain-containing protein.	Uncharacterized protein.	0.999
Fanca.L	ube2d1	A0A310UBA7	Q6DFK8	Fanconi_A_N domain-containing protein.	Ube2d2-prov protein; Belongs to the ubiquitin-conjugating enzyme family.	0.541
Fanca.L	ube2t	A0A310UBA7	A0A1L8H703	Fanconi_A_N domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.999
Fancm.L	Fanca.L	A0A1L8F9Q1	A0A310UBA7	Uncharacterized protein.	Fanconi_A_N domain-containing protein.	0.999
Fancm.L	Sumo1.L	A0A1L8F9Q1	A0A1L8EWZ5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.529
Fancm.L	Sumo1.S	A0A1L8F9Q1	A0A1L8EPQ0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.529
Fancm.L	Ube2v1.L	A0A1L8F9Q1	A0A1L8ESM5	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.687
Fancm.L	fancd2	A0A1L8F9Q1	A0A1L8GP71	Uncharacterized protein.	Uncharacterized protein.	0.999
Fancm.L	fanci	A0A1L8F9Q1	A0A1L8H0X8	Uncharacterized protein.	Uncharacterized protein.	0.999
Fancm.L	pcna	A0A1L8F9Q1	Q9I893	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.981
Fancm.L	ube2d1	A0A1L8F9Q1	Q6DFK8	Uncharacterized protein.	Ube2d2-prov protein; Belongs to the ubiquitin-conjugating enzyme family.	0.600
Fancm.L	ube2t	A0A1L8F9Q1	A0A1L8H703	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.992
Rwdd2a.L	Sumo1.L	A0A1L8G9I7	A0A1L8EWZ5	RWD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.470
Rwdd2a.L	Sumo1.S	A0A1L8G9I7	A0A1L8EPQ0	RWD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.470
Rwdd2a.L	Ube2v1.L	A0A1L8G9I7	A0A1L8ESM5	RWD domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.778
Rwdd2a.L	rwdd1-2	A0A1L8G9I7	Q68EW4	RWD domain-containing protein.	MGC84211 protein.	0.956
Rwdd2a.L	ube2d1	A0A1L8G9I7	Q6DFK8	RWD domain-containing protein.	Ube2d2-prov protein; Belongs to the ubiquitin-conjugating enzyme family.	0.894
Rwdd2a.L	ube2t	A0A1L8G9I7	A0A1L8H703	RWD domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.776