STRINGSTRING
Prkdc.L Prkdc.L topbp1 topbp1 h2ax h2ax chek1-2 chek1-2 chek1 chek1 crb2 crb2 trrap trrap Hus1 Hus1 rad9a rad9a Clspn.S Clspn.S PIK3R1 PIK3R1 Hist2h2ab.S Hist2h2ab.S Rad17.L Rad17.L cdc45 cdc45 rad50-2 rad50-2 rad50 rad50 xpc xpc Rad26 Rad26 atrip atrip
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Prkdc.LUncharacterized protein; Belongs to the PI3/PI4-kinase family. (4146 aa)
topbp1Uncharacterized protein. (1573 aa)
h2axHistone H2A; Belongs to the histone H2A family. (139 aa)
chek1-2Protein kinase domain-containing protein. (510 aa)
chek1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (474 aa)
crb2Uncharacterized protein. (1472 aa)
trrapUncharacterized protein; Belongs to the PI3/PI4-kinase family. (3838 aa)
Hus1Checkpoint protein; Belongs to the HUS1 family. (282 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (377 aa)
Clspn.SClaspin. (1286 aa)
PIK3R1Phosphoinositide-3-kinase. (722 aa)
Hist2h2ab.SHistone H2A; Belongs to the histone H2A family. (139 aa)
Rad17.LUncharacterized protein. (674 aa)
cdc45Uncharacterized protein. (567 aa)
rad50-2Zinc-hook domain-containing protein. (1312 aa)
rad50Zinc-hook domain-containing protein. (1311 aa)
xpcUncharacterized protein. (1062 aa)
Rad26Uncharacterized protein. (798 aa)
atripUncharacterized protein. (801 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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