STRINGSTRING
stmn3-2 stmn3-2 cdc27 cdc27 cdc27-2 cdc27-2 Pcnt.L Pcnt.L stmn2 stmn2 pxdn pxdn stmn4 stmn4 pxdn-2 pxdn-2 itfg1 itfg1 ckap5 ckap5 Rho.L Rho.L med20 med20 Stmn1.S Stmn1.S stmn1 stmn1 stmn3 stmn3 rac1 rac1 stmn2-2 stmn2-2 acta2 acta2 actl6a actl6a rac3 rac3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
stmn3-2Stathmin; Belongs to the stathmin family. (180 aa)
cdc27Uncharacterized protein. (833 aa)
cdc27-2Uncharacterized protein. (834 aa)
Pcnt.LPACT_coil_coil domain-containing protein. (4481 aa)
stmn2Stathmin; Belongs to the stathmin family. (178 aa)
pxdnUncharacterized protein. (1461 aa)
stmn4Stathmin; Belongs to the stathmin family. (185 aa)
pxdn-2Uncharacterized protein. (1464 aa)
itfg1Uncharacterized protein. (601 aa)
ckap5Uncharacterized protein. (2065 aa)
Rho.LRhodopsin. (459 aa)
med20Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (211 aa)
Stmn1.SUncharacterized protein. (242 aa)
stmn1Stathmin; Belongs to the stathmin family. (145 aa)
stmn3Stathmin; Belongs to the stathmin family. (180 aa)
rac1MGC114731 protein. (192 aa)
stmn2-2Stathmin; Belongs to the stathmin family. (178 aa)
acta2MGC78870 protein. (377 aa)
actl6aBaf53a-pending-prov protein; Belongs to the actin family. (429 aa)
rac3RAC1 protein. (192 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.