33 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	smn1-2	LOC398438 protein. (282 aa)
	hnrnpu	Uncharacterized protein. (779 aa)
	cfl1	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (168 aa)
	Elavl4.L	ELAV-like protein; Belongs to the RRM elav family. (400 aa)
	Cfl1.L	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (292 aa)
	Strap.S	WD_REPEATS_REGION domain-containing protein. (375 aa)
	Strap.L	WD_REPEATS_REGION domain-containing protein. (370 aa)
	Khsrp.L	Uncharacterized protein. (675 aa)
	Stmn1.S	Uncharacterized protein. (242 aa)
	hnrnpr	Uncharacterized protein. (532 aa)
	stmn1	Stathmin; Belongs to the stathmin family. (145 aa)
	smn1	Tudor domain-containing protein. (303 aa)
	pten	Phosphatase and tensin homolog S homeolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (402 aa)
	fmr1-A	Fragile X mental retardation 1. (564 aa)
	stmn3	Stathmin; Belongs to the stathmin family. (180 aa)
	stmn2-2	Stathmin; Belongs to the stathmin family. (178 aa)
	A0A1L8G7I3	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (153 aa)
	pls3	MGC68681 protein. (629 aa)
	rhoa	MGC64296 protein. (193 aa)
	g3bp1-2	G3bp-prov protein. (470 aa)
	dstn	MGC53245 protein; Belongs to the actin-binding proteins ADF family. (153 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)
	stmn3-2	Stathmin; Belongs to the stathmin family. (180 aa)
	Cfl2.S	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (310 aa)
	fmr1	Uncharacterized protein. (564 aa)
	A0A1L8F383	Uncharacterized protein. (631 aa)
	gemin2	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (267 aa)
	cfl2	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (167 aa)
	Tial1.S	Uncharacterized protein. (351 aa)
	nrn1	Uncharacterized protein. (144 aa)
	nrn1-2	Uncharacterized protein. (144 aa)
	stmn2	Stathmin; Belongs to the stathmin family. (178 aa)
	stmn4	Stathmin; Belongs to the stathmin family. (185 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F383	A0A1L8G7I3	A0A1L8F383	A0A1L8G7I3	Uncharacterized protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.407
A0A1L8F383	Cfl1.L	A0A1L8F383	A0A1L8GJZ1	Uncharacterized protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.405
A0A1L8F383	Cfl2.S	A0A1L8F383	A0A1L8EZQ8	Uncharacterized protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.407
A0A1L8F383	actl6a	A0A1L8F383	Q7ZYI5	Uncharacterized protein.	Baf53a-pending-prov protein; Belongs to the actin family.	0.499
A0A1L8F383	cfl1	A0A1L8F383	A0A1L8GCW3	Uncharacterized protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.407
A0A1L8F383	cfl2	A0A1L8F383	A0A1L8FAQ1	Uncharacterized protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.407
A0A1L8F383	dstn	A0A1L8F383	Q7ZXD4	Uncharacterized protein.	MGC53245 protein; Belongs to the actin-binding proteins ADF family.	0.406
A0A1L8F383	gemin2	A0A1L8F383	A0A1L8F470	Uncharacterized protein.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.490
A0A1L8F383	smn1	A0A1L8F383	A0A1L8HRB1	Uncharacterized protein.	Tudor domain-containing protein.	0.807
A0A1L8F383	smn1-2	A0A1L8F383	Q6NU78	Uncharacterized protein.	LOC398438 protein.	0.799
A0A1L8G7I3	A0A1L8F383	A0A1L8G7I3	A0A1L8F383	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	Uncharacterized protein.	0.407
A0A1L8G7I3	Cfl1.L	A0A1L8G7I3	A0A1L8GJZ1	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.408
A0A1L8G7I3	actl6a	A0A1L8G7I3	Q7ZYI5	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.992
A0A1L8G7I3	fmr1	A0A1L8G7I3	A0A1L8F2W4	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	Uncharacterized protein.	0.400
A0A1L8G7I3	fmr1-A	A0A1L8G7I3	B7ZRL0	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	Fragile X mental retardation 1.	0.402
A0A1L8G7I3	pls3	A0A1L8G7I3	Q6P7I8	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	MGC68681 protein.	0.462
A0A1L8G7I3	rhoa	A0A1L8G7I3	Q7SZA9	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	MGC64296 protein.	0.902
Cfl1.L	A0A1L8F383	A0A1L8GJZ1	A0A1L8F383	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	Uncharacterized protein.	0.405
Cfl1.L	A0A1L8G7I3	A0A1L8GJZ1	A0A1L8G7I3	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.408
Cfl1.L	Cfl2.S	A0A1L8GJZ1	A0A1L8EZQ8	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.464