35 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	plk1	Serine/threonine-protein kinase PLK. (598 aa)
	Arf6.S	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (215 aa)
	Was.S	Uncharacterized protein. (472 aa)
	Was.L	Uncharacterized protein. (471 aa)
	fmn1	FH2 domain-containing protein. (1393 aa)
	cdk1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (302 aa)
	Cdk1.L	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (333 aa)
	wasf1	WH2 domain-containing protein. (561 aa)
	wasf1-2	WH2 domain-containing protein. (553 aa)
	Arhgap1.S	Uncharacterized protein. (473 aa)
	wasll	Uncharacterized protein. (412 aa)
	Arhgap1.L	Uncharacterized protein. (435 aa)
	Ccnb1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (397 aa)
	rap1b	Uncharacterized protein. (184 aa)
	diaph1	Uncharacterized protein. (1272 aa)
	kif23	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (962 aa)
	arhgef7	Uncharacterized protein. (818 aa)
	Git1	Uncharacterized protein. (737 aa)
	nras	Uncharacterized protein. (189 aa)
	Wipf2.S	WH2 domain-containing protein. (448 aa)
	rac1	MGC114731 protein. (192 aa)
	rabif	MGC115104 protein. (118 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)
	rab35l	Uncharacterized protein. (201 aa)
	rhoa	MGC64296 protein. (193 aa)
	git2	MGC80878 protein. (759 aa)
	rala	Ras related small G protein RAL-A. (206 aa)
	arf6.2	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	arhgef7-2	Uncharacterized protein. (802 aa)
	Arf6	Arf6 protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	ralb	Uncharacterized protein. (206 aa)
	wipf1	WH2 domain-containing protein. (491 aa)
	Plk1.S	Serine/threonine-protein kinase PLK. (598 aa)
	ralb-2	Uncharacterized protein. (206 aa)
	wipf1-2	WH2 domain-containing protein. (525 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arf6	Arhgap1.L	Q5EAX8	A0A1L8GIS6	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.496
Arf6	Arhgap1.S	Q5EAX8	A0A1L8GE02	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.496
Arf6	Git1	Q5EAX8	A0A1L8HD66	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.470
Arf6	Was.L	Q5EAX8	A0A1L8F5H8	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.487
Arf6	Was.S	Q5EAX8	A0A1L8F464	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.487
Arf6	actl6a	Q5EAX8	Q7ZYI5	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.627
Arf6	fmn1	Q5EAX8	A0A1L8FAR9	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	FH2 domain-containing protein.	0.437
Arf6	git2	Q5EAX8	Q6GNU0	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	MGC80878 protein.	0.562
Arf6	kif23	Q5EAX8	A0A1L8H194	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.885
Arf6	rab35l	Q5EAX8	A0A1L8I076	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.518
Arf6	rabif	Q5EAX8	Q569S2	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	MGC115104 protein.	0.693
Arf6	rac1	Q5EAX8	Q58E25	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	MGC114731 protein.	0.616
Arf6	rala	Q5EAX8	Q9I8H8	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Ras related small G protein RAL-A.	0.443
Arf6	rhoa	Q5EAX8	Q7SZA9	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	MGC64296 protein.	0.625
Arf6	wasll	Q5EAX8	A0A1L8GH79	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.411
Arf6.S	Arhgap1.L	A0A1L8F420	A0A1L8GIS6	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.496
Arf6.S	Arhgap1.S	A0A1L8F420	A0A1L8GE02	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.496
Arf6.S	Git1	A0A1L8F420	A0A1L8HD66	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.471
Arf6.S	Was.L	A0A1L8F420	A0A1L8F5H8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.487
Arf6.S	Was.S	A0A1L8F420	A0A1L8F464	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.487