11 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100189571	Uncharacterized protein. (608 aa)
	ctnnb1	Beta-catenin protein. (781 aa)
	nr2f2	Nr2f2 protein. (405 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (926 aa)
	lyve1	Link domain-containing protein. (331 aa)
	Alb.S	Uncharacterized protein. (607 aa)
	A0A310U5D8	Rad60-SLD domain-containing protein. (67 aa)
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	sumo2	Small ubiquitin-related modifier. (95 aa)
	pten	Phosphatase and tensin homolog S homeolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (402 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A310U5D8	Sumo1.L	A0A310U5D8	A0A1L8EWZ5	Rad60-SLD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.676
A0A310U5D8	Sumo1.S	A0A310U5D8	A0A1L8EPQ0	Rad60-SLD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.676
Alb.S	ctnnb1	A0A1L8HMG9	Q63ZT4	Uncharacterized protein.	Beta-catenin protein.	0.633
LOC100189571	ctnnb1	B7ZRX0	Q63ZT4	Uncharacterized protein.	Beta-catenin protein.	0.687
Sumo1.L	A0A310U5D8	A0A1L8EWZ5	A0A310U5D8	Ubiquitin-like domain-containing protein.	Rad60-SLD domain-containing protein.	0.676
Sumo1.L	nrp1	A0A1L8EWZ5	A0A1L8FVE1	Ubiquitin-like domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.460
Sumo1.L	sumo2	A0A1L8EWZ5	A0A1L8EMU2	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.701
Sumo1.S	A0A310U5D8	A0A1L8EPQ0	A0A310U5D8	Ubiquitin-like domain-containing protein.	Rad60-SLD domain-containing protein.	0.676
Sumo1.S	nrp1	A0A1L8EPQ0	A0A1L8FVE1	Ubiquitin-like domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.460
Sumo1.S	sumo2	A0A1L8EPQ0	A0A1L8EMU2	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.701
ctnnb1	Alb.S	Q63ZT4	A0A1L8HMG9	Beta-catenin protein.	Uncharacterized protein.	0.633
ctnnb1	LOC100189571	Q63ZT4	B7ZRX0	Beta-catenin protein.	Uncharacterized protein.	0.687
ctnnb1	pten	Q63ZT4	A1L2J3	Beta-catenin protein.	Phosphatase and tensin homolog S homeolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.	0.798
lyve1	nr2f2	A0A1L8GIJ1	Q7ZXI7	Link domain-containing protein.	Nr2f2 protein.	0.639
nr2f2	lyve1	Q7ZXI7	A0A1L8GIJ1	Nr2f2 protein.	Link domain-containing protein.	0.639
nr2f2	nrp1	Q7ZXI7	A0A1L8FVE1	Nr2f2 protein.	Neuropilin; Belongs to the neuropilin family.	0.561
nrp1	Sumo1.L	A0A1L8FVE1	A0A1L8EWZ5	Neuropilin; Belongs to the neuropilin family.	Ubiquitin-like domain-containing protein.	0.460
nrp1	Sumo1.S	A0A1L8FVE1	A0A1L8EPQ0	Neuropilin; Belongs to the neuropilin family.	Ubiquitin-like domain-containing protein.	0.460
nrp1	nr2f2	A0A1L8FVE1	Q7ZXI7	Neuropilin; Belongs to the neuropilin family.	Nr2f2 protein.	0.561
pten	ctnnb1	A1L2J3	Q63ZT4	Phosphatase and tensin homolog S homeolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.	Beta-catenin protein.	0.798