31 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Glb1l2.S	Beta-galactosidase. (616 aa)
	prkaca	cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily. (351 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)
	ctnnb1	Beta-catenin protein. (781 aa)
	dkk1-2	Dickkopf homolog 1. (259 aa)
	invs-a	Inversin. (1007 aa)
	xfz8	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family. (583 aa)
	nf-at	Nuclear factor of activated T-cell. (884 aa)
	lhx1	Homeobox protein. (403 aa)
	lif	Uncharacterized protein. (216 aa)
	A0A1L8HPW4	Uncharacterized protein. (216 aa)
	Fzd4.S	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (523 aa)
	A0A1L8H779	Uncharacterized protein. (405 aa)
	Prkacb.S	Uncharacterized protein; Belongs to the protein kinase superfamily. (338 aa)
	nfatc3	RHD domain-containing protein. (885 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (396 aa)
	fzd6	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (724 aa)
	Glb1l.L	Beta-galactosidase. (645 aa)
	wnt3a	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
	Fzd6.S	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (715 aa)
	glb1l2	Beta-galactosidase. (634 aa)
	dkk1	Dickkopf_N domain-containing protein. (263 aa)
	Arhgef19.L	Uncharacterized protein. (570 aa)
	wnt11b	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (353 aa)
	fzd2	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (551 aa)
	cited1	Uncharacterized protein. (142 aa)
	Nfatc2.S	RHD domain-containing protein. (884 aa)
	wnt9b.2	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (357 aa)
	nfatc2	RHD domain-containing protein. (896 aa)
	glb1	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family. (642 aa)
	fzd7	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (549 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8H779	wnt9b.2	A0A1L8H779	A0A1L8ESG2	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.427
A0A1L8HPW4	lif	A0A1L8HPW4	A0A1L8HZU9	Uncharacterized protein.	Uncharacterized protein.	0.901
Arhgef19.L	actl6a	A0A1L8FHI8	Q7ZYI5	Uncharacterized protein.	Baf53a-pending-prov protein; Belongs to the actin family.	0.483
Fzd4.S	Fzd6.S	A0A1L8HB90	A0A1L8FTP5	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.586
Fzd4.S	ctnnb1	A0A1L8HB90	Q63ZT4	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Beta-catenin protein.	0.871
Fzd4.S	dkk1	A0A1L8HB90	A0A1L8FIS6	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Dickkopf_N domain-containing protein.	0.663
Fzd4.S	dkk1-2	A0A1L8HB90	O57464	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Dickkopf homolog 1.	0.660
Fzd4.S	fzd2	A0A1L8HB90	A0A1L8EL29	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.406
Fzd4.S	fzd6	A0A1L8HB90	A0A1L8FZR1	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.584
Fzd4.S	fzd7	A0A1L8HB90	A0A1L8EX17	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.417
Fzd4.S	wnt11b	A0A1L8HB90	A0A1L8F6W4	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.971
Fzd4.S	wnt3a	A0A1L8HB90	A0A1L8FUX8	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.963
Fzd4.S	wnt9b.2	A0A1L8HB90	A0A1L8ESG2	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.909
Fzd6.S	Fzd4.S	A0A1L8FTP5	A0A1L8HB90	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.586
Fzd6.S	actl6a	A0A1L8FTP5	Q7ZYI5	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.423
Fzd6.S	ctnnb1	A0A1L8FTP5	Q63ZT4	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Beta-catenin protein.	0.803
Fzd6.S	dkk1	A0A1L8FTP5	A0A1L8FIS6	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Dickkopf_N domain-containing protein.	0.447
Fzd6.S	dkk1-2	A0A1L8FTP5	O57464	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Dickkopf homolog 1.	0.448
Fzd6.S	fzd2	A0A1L8FTP5	A0A1L8EL29	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.445
Fzd6.S	fzd7	A0A1L8FTP5	A0A1L8EX17	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.450