10 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cd247.L	Uncharacterized protein. (217 aa)
	Rtn3.L	Reticulon. (206 aa)
	RTN3	Reticulon. (214 aa)
	Ptpn11.S	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (595 aa)
	ptpn11b	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
	zap70	Tyrosine-protein kinase. (617 aa)
	tyrobp	ITAM-bearing signaling subunit. (104 aa)
	syk	Tyrosine-protein kinase. (605 aa)
	pigr	Ig-like domain-containing protein. (593 aa)
	piga	Uncharacterized protein. (490 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cd247.L	Ptpn11.S	A0A1L8H5J4	Q92124	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.651
Cd247.L	ptpn11b	A0A1L8H5J4	Q6GP31	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.654
Cd247.L	syk	A0A1L8H5J4	A0A1L8HYI7	Uncharacterized protein.	Tyrosine-protein kinase.	0.962
Cd247.L	tyrobp	A0A1L8H5J4	B1NA59	Uncharacterized protein.	ITAM-bearing signaling subunit.	0.897
Cd247.L	zap70	A0A1L8H5J4	Q6DCV6	Uncharacterized protein.	Tyrosine-protein kinase.	0.997
Ptpn11.S	Cd247.L	Q92124	A0A1L8H5J4	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Uncharacterized protein.	0.651
Ptpn11.S	syk	Q92124	A0A1L8HYI7	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.959
Ptpn11.S	zap70	Q92124	Q6DCV6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.663
piga	pigr	A0A1L8HD52	A0A1L8HF15	Uncharacterized protein.	Ig-like domain-containing protein.	0.757
pigr	piga	A0A1L8HF15	A0A1L8HD52	Ig-like domain-containing protein.	Uncharacterized protein.	0.757
pigr	tyrobp	A0A1L8HF15	B1NA59	Ig-like domain-containing protein.	ITAM-bearing signaling subunit.	0.661
ptpn11b	Cd247.L	Q6GP31	A0A1L8H5J4	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Uncharacterized protein.	0.654
ptpn11b	syk	Q6GP31	A0A1L8HYI7	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.961
ptpn11b	zap70	Q6GP31	Q6DCV6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein kinase.	0.617
syk	Cd247.L	A0A1L8HYI7	A0A1L8H5J4	Tyrosine-protein kinase.	Uncharacterized protein.	0.962
syk	Ptpn11.S	A0A1L8HYI7	Q92124	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.959
syk	ptpn11b	A0A1L8HYI7	Q6GP31	Tyrosine-protein kinase.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.961
syk	tyrobp	A0A1L8HYI7	B1NA59	Tyrosine-protein kinase.	ITAM-bearing signaling subunit.	0.918
tyrobp	Cd247.L	B1NA59	A0A1L8H5J4	ITAM-bearing signaling subunit.	Uncharacterized protein.	0.897
tyrobp	pigr	B1NA59	A0A1L8HF15	ITAM-bearing signaling subunit.	Ig-like domain-containing protein.	0.661