STRINGSTRING
frmd6 frmd6 ihh-2 ihh-2 ihh ihh extl2 extl2 ext2-2 ext2-2 ext2 ext2 tgfb2-2 tgfb2-2 tgfb2 tgfb2 frmd6-2 frmd6-2 tgfb1-2 tgfb1-2 tgfb1 tgfb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
frmd6FERM domain-containing protein. (607 aa)
ihh-2Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (409 aa)
ihhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (409 aa)
extl2MGC80258 protein. (325 aa)
ext2-2Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (718 aa)
ext2Uncharacterized protein; Belongs to the glycosyltransferase 47 family. (718 aa)
tgfb2-2Transforming growth factor beta; Belongs to the TGF-beta family. (413 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (413 aa)
frmd6-2FERM domain-containing protein. (610 aa)
tgfb1-2Transforming growth factor beta; Belongs to the TGF-beta family. (382 aa)
tgfb1Transforming growth factor beta; Belongs to the TGF-beta family. (382 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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