STRINGSTRING
zranb1 zranb1 usp2-2 usp2-2 ube2w ube2w hist2h3c hist2h3c H2B-2 H2B-2 Rangap1.S Rangap1.S Otub1.L Otub1.L uba2 uba2 A0A1L8GS29 A0A1L8GS29 Ube2n.S Ube2n.S A0A1L8GW65 A0A1L8GW65 ube2n ube2n uchl3 uchl3 Mars Mars yars yars Mars.L Mars.L A0A1L8HMD5 A0A1L8HMD5 dot1l dot1l ubc ubc dot1l-2 dot1l-2 A0A310TPP7 A0A310TPP7 A0A310TTQ1 A0A310TTQ1 Hist2h2ab.S Hist2h2ab.S usp5 usp5 otub1 otub1 uchl3-2 uchl3-2 usp5-2 usp5-2 rangap1 rangap1 snca snca ubc-2 ubc-2 H2B H2B pcna pcna sumo2 sumo2 h3f3b h3f3b Sumo1.S Sumo1.S Ube2v1.L Ube2v1.L Sumo1.L Sumo1.L A0A1L8EY07 A0A1L8EY07 Uba1.S Uba1.S Mars2.L Mars2.L sae1 sae1 usp2 usp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
zranb1Uncharacterized protein. (701 aa)
usp2-2Ubiquitin carboxyl-terminal hydrolase. (559 aa)
ube2wUBIQUITIN_CONJUGAT_2 domain-containing protein. (176 aa)
hist2h3cHistone H3; Belongs to the histone H3 family. (136 aa)
H2B-2Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (233 aa)
Rangap1.SRanGAP1_C domain-containing protein. (583 aa)
Otub1.LUbiquitin thioesterase. (268 aa)
uba2SUMO-activating enzyme subunit 2; The heterodimer acts as an E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2. Belongs to the ubiquitin-activating E1 family. (641 aa)
A0A1L8GS29Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (268 aa)
Ube2n.SUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
A0A1L8GW65Tyrosine--tRNA ligase. (464 aa)
ube2nUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
uchl3Ubiquitin carboxyl-terminal hydrolase. (230 aa)
MarsUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (905 aa)
yarsTyrosine--tRNA ligase. (527 aa)
Mars.LWHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (655 aa)
A0A1L8HMD5Alpha-synuclein; Belongs to the synuclein family. (212 aa)
dot1lHistone-lysine N-methyltransferase, H3 lysine-79 specific. (1396 aa)
ubcUncharacterized protein. (533 aa)
dot1l-2Histone-lysine N-methyltransferase, H3 lysine-79 specific. (1396 aa)
A0A310TPP7Tyrosine--tRNA ligase. (447 aa)
A0A310TTQ1Histone H3; Belongs to the histone H3 family. (136 aa)
Hist2h2ab.SHistone H2A; Belongs to the histone H2A family. (139 aa)
usp5Ubiquitin carboxyl-terminal hydrolase. (832 aa)
otub1Ubiquitin thioesterase. (269 aa)
uchl3-2Ubiquitin carboxyl-terminal hydrolase. (230 aa)
usp5-2Ubiquitin carboxyl-terminal hydrolase. (855 aa)
rangap1Rangap1-prov protein. (584 aa)
sncaAlpha-synuclein; Belongs to the synuclein family. (141 aa)
ubc-2Ubc-prov protein. (609 aa)
H2BHistone H2B; Belongs to the histone H2B family. (126 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
h3f3bHistone H3; Belongs to the histone H3 family. (136 aa)
Sumo1.SUbiquitin-like domain-containing protein. (141 aa)
Ube2v1.LUBIQUITIN_CONJUGAT_2 domain-containing protein. (201 aa)
Sumo1.LUbiquitin-like domain-containing protein. (148 aa)
A0A1L8EY07Histone H3; Belongs to the histone H3 family. (120 aa)
Uba1.SUBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family. (1044 aa)
Mars2.LtRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (562 aa)
sae1ThiF domain-containing protein. (344 aa)
usp2Ubiquitin carboxyl-terminal hydrolase. (559 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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