STRINGSTRING
tcea1 tcea1 foxj1 foxj1 Foxj1.L Foxj1.L foxj1.2 foxj1.2 pxdn pxdn pxdn-2 pxdn-2 Sox5.S Sox5.S Sox13.S Sox13.S hnf1b hnf1b hnf1b-2 hnf1b-2 Gapdh.S Gapdh.S gapdh gapdh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tcea1TFIIS elongation factor. (303 aa)
foxj1Fork-head domain-containing protein. (439 aa)
Foxj1.LFork-head domain-containing protein. (495 aa)
foxj1.2Fork-head domain-containing protein. (402 aa)
pxdnUncharacterized protein. (1461 aa)
pxdn-2Uncharacterized protein. (1464 aa)
Sox5.SHMG box domain-containing protein. (742 aa)
Sox13.SHMG box domain-containing protein. (567 aa)
hnf1bMGC68543 protein. (561 aa)
hnf1b-2Tcf2 protein. (561 aa)
Gapdh.SGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (333 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.