59 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	syk	Tyrosine-protein kinase. (605 aa)
	ppp1r9b	PDZ domain-containing protein. (748 aa)
	Gnas.S	Uncharacterized protein. (217 aa)
	cxcr4	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (358 aa)
	ppp1r9b-2	PDZ domain-containing protein. (748 aa)
	Cxcr4.L	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (450 aa)
	Ptgir.S	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (456 aa)
	btk	Tyrosine-protein kinase. (648 aa)
	ptgir	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (381 aa)
	Rgs10.L	RGS domain-containing protein. (262 aa)
	esam	Ig-like domain-containing protein. (438 aa)
	Rap1gap.L	Uncharacterized protein. (72 aa)
	lyn	Tyrosine-protein kinase. (508 aa)
	lyn-2	Tyrosine-protein kinase. (508 aa)
	inpp5d	SH2 domain-containing protein. (1099 aa)
	pik3cb	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1070 aa)
	fyn	Tyrosine-protein kinase. (537 aa)
	pik3cb-2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1070 aa)
	Inpp5d.L	SH2 domain-containing protein. (1111 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (396 aa)
	rgs16	RGS domain-containing protein. (189 aa)
	rgs18	RGS domain-containing protein. (163 aa)
	Itpr1.S	Uncharacterized protein. (2693 aa)
	A0A1L8GJQ6	PH domain-containing protein. (660 aa)
	Prkacb.S	Uncharacterized protein; Belongs to the protein kinase superfamily. (338 aa)
	rgs16-2	RGS domain-containing protein. (190 aa)
	Rgs2.L	RGS domain-containing protein. (215 aa)
	A0A1L8GTE5	Uncharacterized protein. (2543 aa)
	pik3cg	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (1115 aa)
	rap1b	Uncharacterized protein. (184 aa)
	vwf	Uncharacterized protein. (2841 aa)
	A0A1L8H034	Uncharacterized protein. (2543 aa)
	dok2	Uncharacterized protein. (414 aa)
	orai1	Uncharacterized protein. (257 aa)
	ywhag	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (247 aa)
	rasa3	Uncharacterized protein. (833 aa)
	A0A1L8HBG6	SAM domain-containing protein. (669 aa)
	rap1gap2	Rap-GAP domain-containing protein. (733 aa)
	ywhag-2	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (247 aa)
	rasa3-2	Uncharacterized protein. (833 aa)
	Fga.S	Fibrinogen C-terminal domain-containing protein. (763 aa)
	orai2	Uncharacterized protein. (258 aa)
	fga	Fibrinogen C-terminal domain-containing protein. (762 aa)
	A0A1L8I385	Uncharacterized protein. (2303 aa)
	Tln2.S	Uncharacterized protein. (2612 aa)
	PIK3R1	Phosphoinositide-3-kinase. (722 aa)
	fyn-2	Tyrosine-protein kinase. (537 aa)
	src	Tyrosine-protein kinase. (532 aa)
	rgs2	RGS domain-containing protein. (216 aa)
	rabif	MGC115104 protein. (118 aa)
	pecam1-2	Platelet endothelial cell adhesion molecule. (727 aa)
	gnaq	Gnaq-A protein. (359 aa)
	prkca	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (677 aa)
	rgs18-2	MGC80762 protein. (236 aa)
	ptpn11b	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
	rap1a	MGC80662 protein. (185 aa)
	rhoa	MGC64296 protein. (193 aa)
	prkaca	cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily. (351 aa)
	Ptpn11.S	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (595 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GJQ6	A0A1L8GTE5	A0A1L8GJQ6	A0A1L8GTE5	PH domain-containing protein.	Uncharacterized protein.	0.419
A0A1L8GJQ6	A0A1L8H034	A0A1L8GJQ6	A0A1L8H034	PH domain-containing protein.	Uncharacterized protein.	0.419
A0A1L8GJQ6	A0A1L8I385	A0A1L8GJQ6	A0A1L8I385	PH domain-containing protein.	Uncharacterized protein.	0.419
A0A1L8GJQ6	Inpp5d.L	A0A1L8GJQ6	A0A1L8GB96	PH domain-containing protein.	SH2 domain-containing protein.	0.418
A0A1L8GJQ6	Tln2.S	A0A1L8GJQ6	A0A310UCZ7	PH domain-containing protein.	Uncharacterized protein.	0.419
A0A1L8GJQ6	dok2	A0A1L8GJQ6	A0A1L8H221	PH domain-containing protein.	Uncharacterized protein.	0.672
A0A1L8GJQ6	inpp5d	A0A1L8GJQ6	A0A1L8G4S3	PH domain-containing protein.	SH2 domain-containing protein.	0.418
A0A1L8GJQ6	rap1a	A0A1L8GJQ6	Q6J1M0	PH domain-containing protein.	MGC80662 protein.	0.420
A0A1L8GJQ6	rap1b	A0A1L8GJQ6	A0A1L8GUG3	PH domain-containing protein.	Uncharacterized protein.	0.405
A0A1L8GJQ6	rap1gap2	A0A1L8GJQ6	A0A1L8HDT0	PH domain-containing protein.	Rap-GAP domain-containing protein.	0.426
A0A1L8GJQ6	rasa3	A0A1L8GJQ6	A0A1L8H8P8	PH domain-containing protein.	Uncharacterized protein.	0.426
A0A1L8GJQ6	rasa3-2	A0A1L8GJQ6	A0A1L8HGR0	PH domain-containing protein.	Uncharacterized protein.	0.426
A0A1L8GJQ6	syk	A0A1L8GJQ6	A0A1L8HYI7	PH domain-containing protein.	Tyrosine-protein kinase.	0.499
A0A1L8GTE5	A0A1L8GJQ6	A0A1L8GTE5	A0A1L8GJQ6	Uncharacterized protein.	PH domain-containing protein.	0.419
A0A1L8GTE5	fyn	A0A1L8GTE5	A0A1L8G8Y4	Uncharacterized protein.	Tyrosine-protein kinase.	0.476
A0A1L8GTE5	fyn-2	A0A1L8GTE5	B7ZRP5	Uncharacterized protein.	Tyrosine-protein kinase.	0.476
A0A1L8GTE5	lyn	A0A1L8GTE5	A0A1L8FT48	Uncharacterized protein.	Tyrosine-protein kinase.	0.421
A0A1L8GTE5	lyn-2	A0A1L8GTE5	A0A1L8FZ11	Uncharacterized protein.	Tyrosine-protein kinase.	0.421
A0A1L8GTE5	rap1a	A0A1L8GTE5	Q6J1M0	Uncharacterized protein.	MGC80662 protein.	0.634
A0A1L8GTE5	rap1b	A0A1L8GTE5	A0A1L8GUG3	Uncharacterized protein.	Uncharacterized protein.	0.633