16 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ctnnb1	Beta-catenin protein. (781 aa)
	pard6b	Uncharacterized protein. (377 aa)
	pard6b-2	Uncharacterized protein. (376 aa)
	tgfb1	Transforming growth factor beta; Belongs to the TGF-beta family. (382 aa)
	tgfb1-2	Transforming growth factor beta; Belongs to the TGF-beta family. (382 aa)
	tbxt	Uncharacterized protein. (432 aa)
	Prkci.L	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
	Cdh3.S	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (880 aa)
	cdh1	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (871 aa)
	cdh3	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (905 aa)
	f2r	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (418 aa)
	F2r.L	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (419 aa)
	cdh11-2	Cadherin; Cadherins are calcium-dependent cell adhesion proteins. (794 aa)
	tbxt-2	MGC81453 protein. (432 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)
	ptch1-2	Patched-1. (1418 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cdh3.S	Prkci.L	A0A1L8GET9	A0A1L8GAK2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.694
Cdh3.S	actl6a	A0A1L8GET9	Q7ZYI5	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Baf53a-pending-prov protein; Belongs to the actin family.	0.931
Cdh3.S	cdh1	A0A1L8GET9	A0A1L8GKV4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.903
Cdh3.S	cdh11-2	A0A1L8GET9	O93264	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Cadherin; Cadherins are calcium-dependent cell adhesion proteins.	0.536
Cdh3.S	cdh3	A0A1L8GET9	A0A1L8GKW6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.901
Cdh3.S	ctnnb1	A0A1L8GET9	Q63ZT4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Beta-catenin protein.	0.999
Cdh3.S	pard6b	A0A1L8GET9	A0A1L8ELH2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.573
Cdh3.S	pard6b-2	A0A1L8GET9	A0A1L8ESP6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.573
Cdh3.S	tbxt	A0A1L8GET9	A0A1L8G2B1	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.553
Cdh3.S	tbxt-2	A0A1L8GET9	Q6INQ0	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	MGC81453 protein.	0.579
Cdh3.S	tgfb1	A0A1L8GET9	A0A1L8F3Y7	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.435
Cdh3.S	tgfb1-2	A0A1L8GET9	A0A1L8F936	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.435
F2r.L	Prkci.L	A0A1L8I232	A0A1L8GAK2	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.498
F2r.L	f2r	A0A1L8I232	A0A1L8HRF1	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.900
F2r.L	pard6b	A0A1L8I232	A0A1L8ELH2	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.675
F2r.L	pard6b-2	A0A1L8I232	A0A1L8ESP6	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.675
Prkci.L	Cdh3.S	A0A1L8GAK2	A0A1L8GET9	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.694
Prkci.L	F2r.L	A0A1L8GAK2	A0A1L8I232	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.498
Prkci.L	actl6a	A0A1L8GAK2	Q7ZYI5	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Baf53a-pending-prov protein; Belongs to the actin family.	0.768
Prkci.L	cdh1	A0A1L8GAK2	A0A1L8GKV4	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.730