18 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	myc	Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. (420 aa)
	Prkci.L	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (588 aa)
	Cdh3.S	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (880 aa)
	cdh1	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (871 aa)
	cdh3	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (905 aa)
	Rho.L	Rhodopsin. (459 aa)
	Tjp1.S	Uncharacterized protein; Belongs to the MAGUK family. (1705 aa)
	f2r	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (418 aa)
	F2r.L	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (419 aa)
	Prickle3.L	Uncharacterized protein. (437 aa)
	f11r	LOC398627 protein. (291 aa)
	pard6b	Uncharacterized protein. (377 aa)
	pard6b-2	Uncharacterized protein. (376 aa)
	vangl2	Vang-like protein. (521 aa)
	F11r.S	Uncharacterized protein. (289 aa)
	vangl2-2	Vang-like protein. (521 aa)
	prkcz	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (590 aa)
	pard3-2	Uncharacterized protein. (1332 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cdh3.S	F11r.S	A0A1L8GET9	A0A1L8F5C9	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.545
Cdh3.S	Prkci.L	A0A1L8GET9	A0A1L8GAK2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.694
Cdh3.S	Rho.L	A0A1L8GET9	A0A1L8GPJ9	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Rhodopsin.	0.623
Cdh3.S	Tjp1.S	A0A1L8GET9	A0A1L8H090	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Belongs to the MAGUK family.	0.949
Cdh3.S	cdh1	A0A1L8GET9	A0A1L8GKV4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.903
Cdh3.S	cdh3	A0A1L8GET9	A0A1L8GKW6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.901
Cdh3.S	f11r	A0A1L8GET9	Q2VPP6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	LOC398627 protein.	0.596
Cdh3.S	myc	A0A1L8GET9	Q6NRN4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.	0.782
Cdh3.S	pard6b	A0A1L8GET9	A0A1L8ELH2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.573
Cdh3.S	pard6b-2	A0A1L8GET9	A0A1L8ESP6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein.	0.573
Cdh3.S	prkcz	A0A1L8GET9	A0A1L8FM28	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.406
Cdh3.S	vangl2	A0A1L8GET9	A0A1L8F4R0	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Vang-like protein.	0.543
Cdh3.S	vangl2-2	A0A1L8GET9	A0A1L8FCL1	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Vang-like protein.	0.543
F11r.S	Cdh3.S	A0A1L8F5C9	A0A1L8GET9	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.545
F11r.S	Prkci.L	A0A1L8F5C9	A0A1L8GAK2	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.747
F11r.S	Tjp1.S	A0A1L8F5C9	A0A1L8H090	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.995
F11r.S	cdh1	A0A1L8F5C9	A0A1L8GKV4	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.545
F11r.S	cdh3	A0A1L8F5C9	A0A1L8GKW6	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.582
F11r.S	f11r	A0A1L8F5C9	Q2VPP6	Uncharacterized protein.	LOC398627 protein.	0.901
F11r.S	pard3-2	A0A1L8F5C9	A0A1L8FVE8	Uncharacterized protein.	Uncharacterized protein.	0.951