13 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Fzd4.S	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (523 aa)
	fzd2	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (551 aa)
	fzd5	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (569 aa)
	Fzd8.L	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (582 aa)
	fzd1	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (559 aa)
	cspg4l	Uncharacterized protein. (2396 aa)
	fzd9	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (587 aa)
	nectin3	Uncharacterized protein. (524 aa)
	fzd9-2	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (587 aa)
	nectin3-2	Uncharacterized protein. (524 aa)
	fzd10	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (580 aa)
	cspg4	Uncharacterized protein. (2394 aa)
	xfz8	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family. (583 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fzd4.S	fzd1	A0A1L8HB90	A0A1L8FVQ7	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.413
Fzd4.S	fzd2	A0A1L8HB90	A0A1L8EL29	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.406
Fzd8.L	fzd10	A0A1L8FVD0	A0A1L8HQJ0	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.475
cspg4	nectin3	A0A1L8I2C8	A0A1L8H791	Uncharacterized protein.	Uncharacterized protein.	0.453
cspg4	nectin3-2	A0A1L8I2C8	A0A1L8HEG6	Uncharacterized protein.	Uncharacterized protein.	0.453
cspg4l	nectin3	A0A1L8H002	A0A1L8H791	Uncharacterized protein.	Uncharacterized protein.	0.497
cspg4l	nectin3-2	A0A1L8H002	A0A1L8HEG6	Uncharacterized protein.	Uncharacterized protein.	0.497
fzd1	Fzd4.S	A0A1L8FVQ7	A0A1L8HB90	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.413
fzd10	Fzd8.L	A0A1L8HQJ0	A0A1L8FVD0	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.475
fzd10	xfz8	A0A1L8HQJ0	B7ZQV9	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family.	0.473
fzd2	Fzd4.S	A0A1L8EL29	A0A1L8HB90	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.406
nectin3	cspg4	A0A1L8H791	A0A1L8I2C8	Uncharacterized protein.	Uncharacterized protein.	0.453
nectin3	cspg4l	A0A1L8H791	A0A1L8H002	Uncharacterized protein.	Uncharacterized protein.	0.497
nectin3	nectin3-2	A0A1L8H791	A0A1L8HEG6	Uncharacterized protein.	Uncharacterized protein.	0.900
nectin3-2	cspg4	A0A1L8HEG6	A0A1L8I2C8	Uncharacterized protein.	Uncharacterized protein.	0.453
nectin3-2	cspg4l	A0A1L8HEG6	A0A1L8H002	Uncharacterized protein.	Uncharacterized protein.	0.497
nectin3-2	nectin3	A0A1L8HEG6	A0A1L8H791	Uncharacterized protein.	Uncharacterized protein.	0.900
xfz8	fzd10	B7ZQV9	A0A1L8HQJ0	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.473