27 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Stmn1.S	Uncharacterized protein. (242 aa)
	stmn1	Stathmin; Belongs to the stathmin family. (145 aa)
	stmn3	Stathmin; Belongs to the stathmin family. (180 aa)
	Arf6	Arf6 protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	arf6.2	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	stmn2-2	Stathmin; Belongs to the stathmin family. (178 aa)
	actl6a	Baf53a-pending-prov protein; Belongs to the actin family. (429 aa)
	arf1	ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	stmn3-2	Stathmin; Belongs to the stathmin family. (180 aa)
	lgals4.2	Galectin. (319 aa)
	Arf6.S	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (215 aa)
	Lgals4.L	Galectin. (319 aa)
	Cyth1.S	Uncharacterized protein. (469 aa)
	Arf5.L	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (232 aa)
	stmn2	Stathmin; Belongs to the stathmin family. (178 aa)
	SPAST	Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] (600 aa)
	arl14	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (201 aa)
	Mapre3.S	Uncharacterized protein. (316 aa)
	stmn4	Stathmin; Belongs to the stathmin family. (185 aa)
	plek	Uncharacterized protein. (350 aa)
	spast	Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...] (595 aa)
	arl14-2	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (201 aa)
	ckap5	Uncharacterized protein. (2065 aa)
	Ctrl.L	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (263 aa)
	kif2c	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (730 aa)
	Kif21a.L	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1583 aa)
	Tjp1.S	Uncharacterized protein; Belongs to the MAGUK family. (1705 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arf5.L	Arf6	A0A1L8FUX7	Q5EAX8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	0.677
Arf5.L	Arf6.S	A0A1L8FUX7	A0A1L8F420	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.683
Arf5.L	Cyth1.S	A0A1L8FUX7	A0A1L8FNL0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.795
Arf5.L	Kif21a.L	A0A1L8FUX7	A0A1L8GZ50	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.511
Arf5.L	actl6a	A0A1L8FUX7	Q7ZYI5	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.491
Arf5.L	arf6.2	A0A1L8FUX7	Q6DE46	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.677
Arf6	Arf5.L	Q5EAX8	A0A1L8FUX7	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.677
Arf6	Cyth1.S	Q5EAX8	A0A1L8FNL0	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.974
Arf6	actl6a	Q5EAX8	Q7ZYI5	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.627
Arf6	arf1	Q5EAX8	Q8AVF6	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.	0.677
Arf6	plek	Q5EAX8	A0A1L8G6R7	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.487
Arf6.S	Arf5.L	A0A1L8F420	A0A1L8FUX7	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.683
Arf6.S	Cyth1.S	A0A1L8F420	A0A1L8FNL0	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.960
Arf6.S	actl6a	A0A1L8F420	Q7ZYI5	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.610
Arf6.S	arf1	A0A1L8F420	Q8AVF6	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.	0.678
Arf6.S	plek	A0A1L8F420	A0A1L8G6R7	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.488
Ctrl.L	actl6a	A0A1L8GK48	Q7ZYI5	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	Baf53a-pending-prov protein; Belongs to the actin family.	0.518
Cyth1.S	Arf5.L	A0A1L8FNL0	A0A1L8FUX7	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.795
Cyth1.S	Arf6	A0A1L8FNL0	Q5EAX8	Uncharacterized protein.	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	0.974
Cyth1.S	Arf6.S	A0A1L8FNL0	A0A1L8F420	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.960