16 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ube2d3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	ube2b	MGC78891 protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	rnf4	LOC495944 protein. (190 aa)
	sumo2	Small ubiquitin-related modifier. (95 aa)
	Sumo1.S	Ubiquitin-like domain-containing protein. (141 aa)
	Sumo1.L	Ubiquitin-like domain-containing protein. (148 aa)
	Uba1.S	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family. (1044 aa)
	fancf	Uncharacterized protein. (348 aa)
	Fancl.L	RING-type domain-containing protein. (361 aa)
	usp1	Ubiquitin carboxyl-terminal hydrolase. (766 aa)
	fancd2	Uncharacterized protein. (1445 aa)
	A0A1L8GS29	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (268 aa)
	fanci	Uncharacterized protein. (1337 aa)
	Rnf4-a	RING-type domain-containing protein. (190 aa)
	fancc	Uncharacterized protein. (551 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GS29	Sumo1.L	A0A1L8GS29	A0A1L8EWZ5	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ubiquitin-like domain-containing protein.	0.911
A0A1L8GS29	Sumo1.S	A0A1L8GS29	A0A1L8EPQ0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ubiquitin-like domain-containing protein.	0.911
A0A1L8GS29	sumo2	A0A1L8GS29	A0A1L8EMU2	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Small ubiquitin-related modifier.	0.918
A0A1L8GS29	ube2b	A0A1L8GS29	Q6GR64	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	MGC78891 protein; Belongs to the ubiquitin-conjugating enzyme family.	0.840
A0A1L8GS29	ube2d3	A0A1L8GS29	A0A1L8HM82	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.606
A0A1L8GS29	usp1	A0A1L8GS29	A0A1L8GF26	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ubiquitin carboxyl-terminal hydrolase.	0.850
Fancl.L	Rnf4-a	A0A1L8G7F1	A0A1L8HT51	RING-type domain-containing protein.	RING-type domain-containing protein.	0.481
Fancl.L	Sumo1.L	A0A1L8G7F1	A0A1L8EWZ5	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.432
Fancl.L	Sumo1.S	A0A1L8G7F1	A0A1L8EPQ0	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.432
Fancl.L	Uba1.S	A0A1L8G7F1	A0A1L8EZK6	RING-type domain-containing protein.	UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.	0.580
Fancl.L	fancc	A0A1L8G7F1	A0A1L8HYI1	RING-type domain-containing protein.	Uncharacterized protein.	0.999
Fancl.L	fancd2	A0A1L8G7F1	A0A1L8GP71	RING-type domain-containing protein.	Uncharacterized protein.	0.999
Fancl.L	fancf	A0A1L8G7F1	A0A1L8F8Q2	RING-type domain-containing protein.	Uncharacterized protein.	0.999
Fancl.L	fanci	A0A1L8G7F1	A0A1L8H0X8	RING-type domain-containing protein.	Uncharacterized protein.	0.999
Fancl.L	rnf4	A0A1L8G7F1	Q5PQ91	RING-type domain-containing protein.	LOC495944 protein.	0.526
Fancl.L	ube2b	A0A1L8G7F1	Q6GR64	RING-type domain-containing protein.	MGC78891 protein; Belongs to the ubiquitin-conjugating enzyme family.	0.665
Fancl.L	ube2d3	A0A1L8G7F1	A0A1L8HM82	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.851
Fancl.L	usp1	A0A1L8G7F1	A0A1L8GF26	RING-type domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.996
Rnf4-a	Fancl.L	A0A1L8HT51	A0A1L8G7F1	RING-type domain-containing protein.	RING-type domain-containing protein.	0.481
Rnf4-a	Sumo1.L	A0A1L8HT51	A0A1L8EWZ5	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.873